| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0387 |
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| Symbol | |
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| ID | 4956565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 418539 |
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| End bp | 419912 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640179556 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_001111760 |
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| Protein GI | 134298264 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0273741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA CATTCTCCAC AAAGGAAAAA ATACTCCAAT TTATGACAAT ATTATGGCCC
ATACTTATTA CTCAAATTTC ACTTTCTGCC ATGGTCATGC TGGATACAGT CATGTCCGGC
AATGCAGGGG CCAGGGATCT AGCCGGGGTT GCCATCGGTT CCAGCCTCTG GGTACCCATT
TCCACTGGCA TTACGGGCAT TTTACTGGCT GTAACCCCCA TCATTGCCCA GTCTGTAGGA
GCGGGAAGGA GGGACCATGT CCCCTTTACG GTAATCCAAG GGAGCTATCT GGCCATTGCC
ATTTCCATTA TTGTTCTTAT TTGTGGTGCC ATCGCATTAA AACCAGTTTT AAATACCATG
CACTTGGAGT CACCCGTGCG GGACATTGCC AGACGTTACT TAGTGGGGCT TTCCTTCGGC
ATTACCCCCC TGTTCATCTA TACCATATTT CGCTGCTTTA TTGATGCCCT GGGCCAAACA
CGGGTGTCTA TGTTTATTAC GTTGCTGTCC TTGCCCATCA ACATATTATT AAATTACGTA
CTGATTTTTG GCAAGCTGGG TTTTCCCCGT TTGGGTGGCG TGGGTGCAGG TTATGCAACA
GCCATAACTT ATTGGTGTGT TTTTTTCATT GCTCTTTATG TATTGCACAG GGTAGAGCCC
TTTTCCTGTT ACAATTTTTT TAAAAAATGG CTTGGTATCT CTTTCTCCGC TTGGCGAACC
CAGCTTAAGC TGGGTATACC CATTGGCTTC TCTATCTTTT TTGAGACCAG TGTTTTCTCT
GGGGTAACAC TATTGATGAG TCAGTATAAC ACCGTTACCA TCGCTGCACA CCAAGCCGCC
TTAAACTTTG CCTCATTTTT ATATATGGTG CCCTTAAGTA TCTCCATGGC CCTAACTATT
ACCATTGGTT TTGAAGTAGG TGCCCAGCGA TACTCCGATG CTAAACAATA CAGTTTATTG
GGGTTAGGTA TTGCGGTGGG AATGGCTGTC TGCTGTGGCA TTGGTCTACT GCTCTTTGGC
GATCAAGTGG CTGGGTTGTA CACCAAAGAT CAGACGGTTT TTAAATTGAC CCAGCAGTTC
CTAGTATATG CCCTTTTCTT TCAACTTTCT GATGCCATCG CCACACCGGT GCAGGGAATA
CTCCGGGGCT ATAAGGATGT AAATGTTTCA TTTATTGTTG CACTGGCCTC ATACTGGGTT
ATTGGCCTGC CCCTGGGACA TATCCTTTCC CTCTATACGC CCCTGGCAGC CTTTGGCTAC
TGGGTAGGAC TTATTGTGGG TCTAGCCATA GGTGCAACAA GCTTACTGAT TCGTATGGTT
ATCGTTCAAC GAAATGCGGC AATGGGAGGA AAAAAGATTG GTCTGTGCAA ATAA
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| Protein sequence | MKKTFSTKEK ILQFMTILWP ILITQISLSA MVMLDTVMSG NAGARDLAGV AIGSSLWVPI
STGITGILLA VTPIIAQSVG AGRRDHVPFT VIQGSYLAIA ISIIVLICGA IALKPVLNTM
HLESPVRDIA RRYLVGLSFG ITPLFIYTIF RCFIDALGQT RVSMFITLLS LPINILLNYV
LIFGKLGFPR LGGVGAGYAT AITYWCVFFI ALYVLHRVEP FSCYNFFKKW LGISFSAWRT
QLKLGIPIGF SIFFETSVFS GVTLLMSQYN TVTIAAHQAA LNFASFLYMV PLSISMALTI
TIGFEVGAQR YSDAKQYSLL GLGIAVGMAV CCGIGLLLFG DQVAGLYTKD QTVFKLTQQF
LVYALFFQLS DAIATPVQGI LRGYKDVNVS FIVALASYWV IGLPLGHILS LYTPLAAFGY
WVGLIVGLAI GATSLLIRMV IVQRNAAMGG KKIGLCK
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