| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0386 |
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| Symbol | |
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| ID | 4956338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 417644 |
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| End bp | 418555 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640179555 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001111759 |
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| Protein GI | 134298263 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCTGTG CAAATAACCA GGTTGTCCTT TGTGTGGAAG CCAGCCAGAA CGGTAAATTC
CTTAGAGATT TTCTTAAACA CAAGGATATT TCGGATAGAG CATTGAAAAA ACTCCGAAAT
GAAGGGGAAA TTCTTTGCAA TGGCGCTAAG GTCACCTGGC GTACCATCGT TAACACTGGT
GACAAAGTGG TCCTGATATA TCCCATTCCC CCTCGAAACC AGTACCTGCC ACCGGAACCG
TTGGACTTGT CGATTATCTC TGAAGACGAA GATATTGCTT TGGTCAATAA ACAGCCCGGT
ATGTGTGTTC ACCCAACCTT GGCCTACCCT TCCGGTACCC TGGCCAATGG CTTAGTTTAT
CACTGGTTAG AGAACAACCC AGCGCCCACC TTTCATGCCG TAAACCGCAT TGACCGTAAT
ACCTCAGGCC TTGTATTGGT GGCTAAAAAC TCCTACAGTG CACAAAAACT GTTCTTACAG
AGGAAACGTA AACAACTGGC TCGCTCATAC GTTGCCCTAG TTCATGGTAA GATTGTTCAA
AGGAATGGCT ACATCGACCT ACCTTTGGAA AAGTGTGAAG GAAAAACCAC GAAACGTCAA
ATATCAAGTA CCGGCCAGCA AGCGCTGACT CGTTTTGAGG TTCTACAATA TATTACAGAT
TGTACCCTTA TCCGTTTAAT GCCTGAAACT GGTAGAACCC ACCAGATAAG GGTTCATTTA
TCACATTTGG GACATCCTTT GGTAGGAGAT ACACTCTACG GCGGCAGTAT CGCTCAAATA
GGCCGCCATT GCTTACATGC CGATAAAATA TCCTTCCTTC ACCCCAGAAC TGGTCACCCA
ATGTCCTTTC AAATTCCTTT AGCCGAAGAT ATGCTGCAGG TAATAACAGA AATGGGAAGG
GCTAAACTTT GA
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| Protein sequence | MVCANNQVVL CVEASQNGKF LRDFLKHKDI SDRALKKLRN EGEILCNGAK VTWRTIVNTG
DKVVLIYPIP PRNQYLPPEP LDLSIISEDE DIALVNKQPG MCVHPTLAYP SGTLANGLVY
HWLENNPAPT FHAVNRIDRN TSGLVLVAKN SYSAQKLFLQ RKRKQLARSY VALVHGKIVQ
RNGYIDLPLE KCEGKTTKRQ ISSTGQQALT RFEVLQYITD CTLIRLMPET GRTHQIRVHL
SHLGHPLVGD TLYGGSIAQI GRHCLHADKI SFLHPRTGHP MSFQIPLAED MLQVITEMGR
AKL
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