Gene Dred_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0371 
Symbol 
ID4956474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp393972 
End bp395390 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content31% 
IMG OID640179539 
ProductIg domain-containing protein 
Protein accessionYP_001111744 
Protein GI134298248 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCTGT TTTCACCTAA TGAAAATGAT TTTAACTTTA TCCTTGCTGA TGCTGGCAGG 
GATATTTTAA TTAATGGCAT AGCAACAAGG GCATTGATAA GCAATTTAAA AGTTAAATCT
GATTATGACG ATAAATATAT ATCTACGCTA ACTGAACTGT CACAAGGGGA CAGAATAGAA
TATAACGGTT TATACTGGCT TATTGTTTCG GAGGTTAATG GTAAACGCTA TGAAAAATAT
AAAGGGGTTA TGAGGGCTTG CAATTTTGAT ATTAAATTTA ATTTTGCTGG CAATATTAAA
ACATTTCCTG CCATTGTTGA ATCTAAAGTT TTTGACATTG AAACAGGGCA ATATATGACA
CTGCCAGTTG GGAAAATACT TATGACAATT CAAGATAATT CCGACACAAA AAATATTATC
TTAAATCAGA GAATTATTAA GATGGATTCA GCGTGGAAGG TAATAGGAAT TGACAAAACA
AAAAATGGCC TTGTCATTTT GCATTTAGAA AAAGATTCGT TTGGTAGTAG TGATGATAAA
GAAAATGAAA TTGCAAACCG TTGGCAATAT GAACACATTT ATAAATTAAC AATCAACGAG
GGAGAATCAG CAAATATATT AAAAGATGAT ACTTTGCAAT TATCTGTAAA ATTAACTGAT
AATGGAGTTG CAGTTGATAG TCCTTCTATT ACATATGTTT CCAGCGACGC TAATATATGT
AATATTGATA ATAATGGTTT AATTACTGGT ATTGCCGAAG GTAAAGCAAT AATCACTGCT
CAAATGACAG GTAAACCAGA TGTTAAAGAT ACTATTTCTA TTAATGTTAA AGTTAATCAT
AATTATGTAT TGACTATAAC CAATGAATCA GCAACTTTAA ATATTGGAGA TAATTTACAA
TTAAACTATA CATTAACAGA TAATGGAGTT ATAGTTGATA ATCCTAATGT TATATTTACT
TCAAGTGATA ATAATATTGC TACTGTAAAT AGTAGCGGAT TAATTACAGG TATTTCCATT
GGAACAGTAA CGATTACCGC ACAAATGGCA GACAGGCCAG AAATTTATGA TATATTAGAA
GTGACTGTCC AGGAAGTACC TATAAGTCAT AATTATTCTA TTTCCATTAA CGGTGGTGCT
ACTATTAAAC TTAATCAGAC GTTATCATAT ACTGCTACAT TTTATGATAA TGGGGTTGAG
GTGGCAGATC AGAGCGGAAC GTGGTCAATT ACAAGTCCTA ATCCTGATGG CACTACAAAT
GTTTATGCTA CAATCCAGAG CCAAACAGGT AATTCTGTAA GTATTAAAGC AACTAGTACA
TCATCTTATG TCAATAAATA TTTAGAATTA GTTTGTACTT TGAATAGTGA TAATACCATT
AAGGCGAGTA AGCAAATTCA AGTAAAATCT TTGTTCTAA
 
Protein sequence
MNLFSPNEND FNFILADAGR DILINGIATR ALISNLKVKS DYDDKYISTL TELSQGDRIE 
YNGLYWLIVS EVNGKRYEKY KGVMRACNFD IKFNFAGNIK TFPAIVESKV FDIETGQYMT
LPVGKILMTI QDNSDTKNII LNQRIIKMDS AWKVIGIDKT KNGLVILHLE KDSFGSSDDK
ENEIANRWQY EHIYKLTINE GESANILKDD TLQLSVKLTD NGVAVDSPSI TYVSSDANIC
NIDNNGLITG IAEGKAIITA QMTGKPDVKD TISINVKVNH NYVLTITNES ATLNIGDNLQ
LNYTLTDNGV IVDNPNVIFT SSDNNIATVN SSGLITGISI GTVTITAQMA DRPEIYDILE
VTVQEVPISH NYSISINGGA TIKLNQTLSY TATFYDNGVE VADQSGTWSI TSPNPDGTTN
VYATIQSQTG NSVSIKATST SSYVNKYLEL VCTLNSDNTI KASKQIQVKS LF