Gene Dred_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0356 
Symbol 
ID4957072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp375811 
End bp377793 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content47% 
IMG OID640179522 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001111729 
Protein GI134298233 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA TTGGCGTTTT TGTTTGCTGG TGTGGTTCCA ATATAGGCAG TGTTGTTGAT 
GTACCGAGAT TGGCTACGGA AGCAGCCAAG TTTCCCGGAG TGGTTTTTAG CACCGATTAT
AAATATATGT GTTCAGTACC AGGACAAGAT TTAATTGTTC AGAAAATCAG TGAATATCGC
TTGGACAAAG TGGTAATAGC ATCTTGCTCC CCACGGTTAC ATGAGCAAAC CTTTCGAAAG
ACCCTAGAAA GGGCCGGGCT TAATCCATTT ATGATGAGAA TTGCCAATAT CCGGGAACAG
TGTGCCTGGG TACACAGCCG GCAAAAAGAT GGAGCTACGG AAAAGGCCAT TGCACTGGTA
CGGCGGGCTG TCGCTAAAGC GAACAACACA GAGCCCCTAT ATGAAGAAAG GATTCCGGTT
ACCAAGCGGG CACTGGTCAT TGGCGGAGGT ATTGCTGGTA TTCAGGCTGC CCTGGATATT
GCTGATGCCG GCCATGAAGT TGTGCTGGTG GAACGAGAAC CAACCATTGG CGGTAAATCC
GCTATGCTTG ATAAAACCTT CCCCACGCTG GATTGCAGTG GCTGAATTGT CACCCCCAAG
ATGGTTGCTG TGGTACAGCA CCCTAACATT AAGCTTTATA CCTTTGCTGA GGTTTGCGAG
GTAAGCGGCT TTATCGGAAA CTTTAATGTT CGAATTAAAC AAAAACCAAA ATATGTGGAC
CATAACAAAT GTACAGGCTG TGGCACTTGC TGGGAAAAAT GTCCAGCTAA GGTCCCCAGC
GAGTATAACC TACACCTGGG ACAAAGAAAA GCCATTTACA TCAGTTCTCC CCAGGCTGTA
CCGAACAAGC CAATTATTGA CCCAAAGGGA TGCCGTATGC TTTTAAGTGG TAAATGCGGT
GTCTGCCAGA AAGTTTGCCA GGCGGAGGCA ATCAATTATA AGGATACAGA GCAATTTTTT
GAAGAACAAG TAGGGGCTGT GGTCATGGCA ACTGGCTATG ACTTGTTTGA TTGGGCTGGT
TCTTACGGAG AATACGGCCA CAGTAAGTAT CCAGATGTCA TCAGCAGCTT GCAATTTGAA
CGACTACTTA ACAGTTCCGG TCCTACCGGT GGTAAAATAC TTCGGCCGTC GGACAGCAAA
GAACCTAAAA GTATAGTGTT TATTAAATGT GTGGGCTCCA GGGATGAATC AAAGGGTAAG
TCTTACTGCT CTAGGGCCTG CTGCATGTAC ACGGCTAAAC ACGCTCAACA GATACTGGAA
AAGATTGAAG GGGCCAGAGT CTATGTCTTC TACATGGATG TGCGTACTCC AGGAAAGGGT
TATGAGGAAT TTTATCAGCG TTCGGTGAAT GAGGGTGCTT GTTACATAAG GGGTCGAGTT
TCAAAAATTT ACCCCAAGGG TGAAAAATTA GTAGTCAGGG GTGCAGACAC CCTGCTGGGG
CGACCGGTGG AGGTTGAGAC AGACCTGGTG GTATTGGCCA CAGCTATGAC ACCCAGCAGA
GGTTCGGATG AATTGGCCAA GGTAGTTGGG TTTACCACAG ACAAAGATGG TTTTTATCAG
GAAGCCCACC CCAAGCTTAA GCCTGTGGAA ACCAATACCG GCGGTATCTT TTTAGCTGGA
TGTTGCCAGG GTCCCAAGGA TATTCCAGAC ACTGTATCCC AGGCCAGTGC AGCAGCCGCC
AAGGTAATCG TGCTATTATC TAAAGACGAA CTAGCCACCA ACCCAATGGT GTCCCAAATT
GATGAAAGAC GTTGTACCGG ATGTATGGCC TGCCGTGATG TTTGTCCCTT CAATGCCATT
GAAGAAAAAT TAATCACTGA TAAATCAATG GGGCAGGGAG TCCAACGCAC TGTGGCTGCT
ATTAATACTG GTTTATGCCA GGGTTGTGGT GCCTGTGCAG CCACATGCCG CTGCGGTGCC
GCAGATCTTA AGGGTTTTAC AAACCAGCAG GTAATGTCTG AGATCATAGC CCTATGCATA
TAA
 
Protein sequence
MNRIGVFVCW CGSNIGSVVD VPRLATEAAK FPGVVFSTDY KYMCSVPGQD LIVQKISEYR 
LDKVVIASCS PRLHEQTFRK TLERAGLNPF MMRIANIREQ CAWVHSRQKD GATEKAIALV
RRAVAKANNT EPLYEERIPV TKRALVIGGG IAGIQAALDI ADAGHEVVLV EREPTIGGKS
AMLDKTFPTL DCSGUIVTPK MVAVVQHPNI KLYTFAEVCE VSGFIGNFNV RIKQKPKYVD
HNKCTGCGTC WEKCPAKVPS EYNLHLGQRK AIYISSPQAV PNKPIIDPKG CRMLLSGKCG
VCQKVCQAEA INYKDTEQFF EEQVGAVVMA TGYDLFDWAG SYGEYGHSKY PDVISSLQFE
RLLNSSGPTG GKILRPSDSK EPKSIVFIKC VGSRDESKGK SYCSRACCMY TAKHAQQILE
KIEGARVYVF YMDVRTPGKG YEEFYQRSVN EGACYIRGRV SKIYPKGEKL VVRGADTLLG
RPVEVETDLV VLATAMTPSR GSDELAKVVG FTTDKDGFYQ EAHPKLKPVE TNTGGIFLAG
CCQGPKDIPD TVSQASAAAA KVIVLLSKDE LATNPMVSQI DERRCTGCMA CRDVCPFNAI
EEKLITDKSM GQGVQRTVAA INTGLCQGCG ACAATCRCGA ADLKGFTNQQ VMSEIIALCI