| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0347 |
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| Symbol | |
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| ID | 4957263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 363990 |
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| End bp | 366413 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640179513 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001111720 |
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| Protein GI | 134298224 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0028421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCA GCATTAACAA GGCCGCAGTA CTTGGTGCTG GTGTAATGGG TGCAACCATT
GCTGCACATT TGGCCAATGT GGGTATCCCC ACTTATTTAC TAGACATTGT ACCAAACAAG
CTTACTCCAG AGGAGGAAAA AAAGGGGTTA ACTCTGGATA GCCCCCAAGT AAGAAATCGT
TTTTCTATAA ATGGCTTAAA TGATCTGCAA AAGTCAAGAC CAGCAGCCTT TTATGTATCG
GAAAATGCAG CACTTATCAC ACCAGGTAAC TTTGAAGACA ACATAAATGT ACTTGCTGAG
TGTGACTGGA TTATTGAAGT AGTTGTTGAA AGGCTTGATA TTAAGCAAAG TTTGTTCAAA
AAGGTTGAAG CCTACCGTAA GCCTGGGTCA ATAGTAGCCT CTAATACATC AGGTATATCC
ATAAATAAAA TTTGCGAGGG ATTATCACAG GAATTCAAAG AACATTTCCT AGGGACACAC
TTCTTTAATC CACCCCGGTA TATGAAACTG CTGGAGATCA TACCTTGCAA TGAAACTTTA
CCGGAAGTAA TAAGCTTTAT GCAAGATTTT AGTGAACGTG TATTGGGTAA AGGTGTTGTA
ATCTGTAAAG ATACCCCCAA TTTTATTGCC AACCGTATTG GTGTTCATGG CATGTGTACA
GTTATCAAGA CAATGTTGGA ATTTAGCCTT ACCACTGAAG AGGTAGATGT CTTGACGGGA
CAAGCCATTT GCCGTCCAAA GAGTGCATCC TTCCGTACCT TAGATATGGT TGGGTTGGAT
GTAATGGTAC ATGTGGCTAA AAATGTATAT GATGTTGCGG TTGAGCCGAA TGAAAAGGCT
ATCTTTGAAA CACCAGAGTT TATTAAAAAA ATGCTGGAAA TGGGTTTGCT AGGTGATAAA
ACTAAGCAAG GTTTCTATAA AAAAGTCAAG ACAGACAAAG GCCGTGAAAC ATTAGTATTT
GATTACAATT CCATGGTATA TAGACCTAAG CAAAAAGCCA GGTTTGCGTC ACTGGAAGCC
GCCAAACAAG CAGGTAAACC GCTTAATCAA ATGAAGGCAT TATTGTTTGG TAAAGACAAA
GGTGCACAAT TTGCTTGGCG TGTTCAAAGA GATTCTCTCG TATATGCAGC CAACCTGTTA
GGTGAAATTT CTGATGATAT CCCGTCCATT GACAATGCCA TGAAGTGGGG CTTCAATTGG
GATTTTGGAC CATTTGAAAT ATGGGATGCC CTTGGTGTTC AGGAAGTGGC CGAACGCATT
AAAGCCGAAG GGGGCACTGT TCCTAAAGTG GTTGAGGATC TACTGGCATC CGGTAGAACC
AGTTTCTATA GCAAAAAAGA CGGTTATAGA TATATCTATG CTCAAAACAC CGAAGAGGAT
GTGCAAGAAC GGATTCCCAA TGGGGTTATT TATCTTAACC CTCTCAAGGA ACAGAAAAAG
GTAATTAAAT CAAATAAAGG CGCCAGCTTG ATTGATATTG GTGATGGCGT GGTTTGCCTG
GAATTCCATA GCAAAGCCAA TGCTATTGGT GATGATATTA TAAGCATGAT CAATACCGCC
GTTACTGAAG TGGAAAAAAA CTATGATGGC CTAGTCATTG GTAACTATGG CAAGAATTTC
TCCGTTGGTG CAAATCTGTT CTTTATACTG ATGGAAGCTG AAAACGAAGA ATACGAGGAG
CTAGGCCTGA TGGTACATTC GTTCCAGCAA GCTAATATGC GACTTAAGTA TTGCAATAAG
CCTGTGGTAG CTGCTCCGCA CGGTATGGTT TTGGGTGGTG GCTGTGAGGT TATCCTTCAT
TCGCACAGGG TTAACACTGC TGCAGAAGCC TATATTGGCC TCGTAGAAGT GGGTGTTGGC
TTAATTCCTG GGGCTGGTGG CTGTAAAGAA ATGGCTTTCC GGGCTGCTGA ACTGGCAACA
CCAAAGAGCC AGATTACTAC CGGCGGTACA AATGGTATCC AACCCATGAT CAATCGGGCC
TTCGAAAATA TTGCCATGGC AAAAGTATCC ACCAGCGGTC CTGAGGCGAT AAAATTAGGC
TATTTACGTT CTAATGATTG CTTTAGCCCG GACCGTGATC GTATCATTGG CGATGCTAAA
CGCATGGTTC TTGAGATGGC AGCAACTGGA TTTAGACCGG GGCAACCCAA GAAGATGCAA
GCTCTTGGGG ATGCTGGTTA TGCGGCAATT GAGTTAGGTA TCTACTCTAT GCTCTGGGGT
AAAATGATTT CTGAGCATGA TGCTAAGATT GCCAAAGAGA TTGCATATGT GCTAACGGGT
GGCCCTGTAA CACCGGGAAC CATTGTATCC GAACAGGATC TGTTAGATCT TGAAAGGCAA
GCATTCTTGA GTTTACTAGG CGAGCCAAAG ACTCTCGAAC GTATGAGACA TATGCTGAAG
TTTAATAAAC CACTGAGGAA CTAG
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| Protein sequence | MNRSINKAAV LGAGVMGATI AAHLANVGIP TYLLDIVPNK LTPEEEKKGL TLDSPQVRNR
FSINGLNDLQ KSRPAAFYVS ENAALITPGN FEDNINVLAE CDWIIEVVVE RLDIKQSLFK
KVEAYRKPGS IVASNTSGIS INKICEGLSQ EFKEHFLGTH FFNPPRYMKL LEIIPCNETL
PEVISFMQDF SERVLGKGVV ICKDTPNFIA NRIGVHGMCT VIKTMLEFSL TTEEVDVLTG
QAICRPKSAS FRTLDMVGLD VMVHVAKNVY DVAVEPNEKA IFETPEFIKK MLEMGLLGDK
TKQGFYKKVK TDKGRETLVF DYNSMVYRPK QKARFASLEA AKQAGKPLNQ MKALLFGKDK
GAQFAWRVQR DSLVYAANLL GEISDDIPSI DNAMKWGFNW DFGPFEIWDA LGVQEVAERI
KAEGGTVPKV VEDLLASGRT SFYSKKDGYR YIYAQNTEED VQERIPNGVI YLNPLKEQKK
VIKSNKGASL IDIGDGVVCL EFHSKANAIG DDIISMINTA VTEVEKNYDG LVIGNYGKNF
SVGANLFFIL MEAENEEYEE LGLMVHSFQQ ANMRLKYCNK PVVAAPHGMV LGGGCEVILH
SHRVNTAAEA YIGLVEVGVG LIPGAGGCKE MAFRAAELAT PKSQITTGGT NGIQPMINRA
FENIAMAKVS TSGPEAIKLG YLRSNDCFSP DRDRIIGDAK RMVLEMAATG FRPGQPKKMQ
ALGDAGYAAI ELGIYSMLWG KMISEHDAKI AKEIAYVLTG GPVTPGTIVS EQDLLDLERQ
AFLSLLGEPK TLERMRHMLK FNKPLRN
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