Gene Dred_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0324 
Symbol 
ID4958011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp338029 
End bp339471 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content41% 
IMG OID640179489 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001111697 
Protein GI134298201 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA AGAAAACCTC TTGGTTTAAA ATATGTGCAC CAAATTCCCT TCGCATTCAA 
CTGTTATCCC GTTCACTGCT AATTCTAGCT GTTTTACTTG GGTTAATTGG TCTTTTACAA
TATGTTTTTA TGCAAGAGGT AATCTACAGA AATAAAGCGG CCAGCCTGCA GAGTCAAGTA
ATGTCCATTT CCCGCCATTT TTGGCAGGAT TTTAGCTTGG AAAGTGAAAA AAACCGGTCG
CCACGTTTTT TTATTCCTGA GGCTGATCTA GCATTTGTGG ATACTGCTGG TAATTATTTT
GTATTGTCTG AAAGACACGG TAATATAAGG CCTCCCCAAT TGAATATCCA AGAATATTTA
GCTAGTTTCG AAGGAAGACC CCGGCTTAAT TACAAGATAA TTAAAGACGA CAGTGGAGTG
GAGCAACTGG TAGTATTACA ACGGGTTTTT GACCATGGCA AGGTGCTTGG GGTTGTTCAA
ATAAATACTA TGACAGGTCC ACTTAAGGAA TTGCTTTTTC GACAACTGTT CACTTTCTTG
TTTCTTTCCC TCATTGCCCT GTTGATGGGA TTGCTTAGTT TTTCGCCTAT AATTAAAAGA
ACACTGGTCC CCTTATTCAA CATGGTGGAT ACTGCGGAAC AAATTGATGC GGGTAATTTA
ACCAAGCGTT TCCCAACTCA GCAAGGACAA ATGGAGATTG ATCGTTTGGC AGATTCCTTT
AATGGAATGT TGGATAGGCT GGAAGCCTCC TTTGAAGCAG AAAGAGAAAC AAAGGAACAA
ATGCGTCGCT TTATAGGGGA TGCTTCCCAT GAACTACGTA CGCCGTTAAC CTCTATTCAC
GGCTTCTTGG AGGTATTGCT CCGGGGTGCA GCCAATCAAC CGGATCAACT AAATAAAGCC
TTAAAAAGCA TGTATGGTGA ATCTGAGCGT ATGAATAAAT TAGTACATGA TCTTTTGCTC
TTAACCAAGC TGGATCATGC ACCTCGTCTT GAAGTTAAAG AAGGTTTTCT GGATACCGTT
ATCCAGGAGA TGGAACCTCA ACTTTGCATT TTGGCTGGTA ACAGAAGGCT ACAACTTATG
GTTGATTCAA ATATAGAATG TAAATTTGAT ACGGATAAGA TGAAACAGGT AATTTTGAAT
TTGTTTCATA ATGCAGTACA GCATACTGAC CCTGAAAAGG GCGAAATAAA GATTTCATTA
TATAAAAGGA CGGACGGGGT GCAACTATCT GTTGAAGATA ACGGACCGGG GATTAAGGAT
TTTCATCTGC CAAAGGTTTT TGATCGTTTT TACCGTATTG ATGCTTCCCG GACACGTAGA
CATGGTGGAG CCGGGTTAGG CCTGGCCATA ACAAAGGCCA TTATAGATGC CCATGGAGGA
ACGATCAACG TTGAAAGTCT CGAAGGAACA GGAAGTACAT TTCATATATG GCTTCCTGCA
TAA
 
Protein sequence
MKNKKTSWFK ICAPNSLRIQ LLSRSLLILA VLLGLIGLLQ YVFMQEVIYR NKAASLQSQV 
MSISRHFWQD FSLESEKNRS PRFFIPEADL AFVDTAGNYF VLSERHGNIR PPQLNIQEYL
ASFEGRPRLN YKIIKDDSGV EQLVVLQRVF DHGKVLGVVQ INTMTGPLKE LLFRQLFTFL
FLSLIALLMG LLSFSPIIKR TLVPLFNMVD TAEQIDAGNL TKRFPTQQGQ MEIDRLADSF
NGMLDRLEAS FEAERETKEQ MRRFIGDASH ELRTPLTSIH GFLEVLLRGA ANQPDQLNKA
LKSMYGESER MNKLVHDLLL LTKLDHAPRL EVKEGFLDTV IQEMEPQLCI LAGNRRLQLM
VDSNIECKFD TDKMKQVILN LFHNAVQHTD PEKGEIKISL YKRTDGVQLS VEDNGPGIKD
FHLPKVFDRF YRIDASRTRR HGGAGLGLAI TKAIIDAHGG TINVESLEGT GSTFHIWLPA