Gene Dred_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0320 
Symbol 
ID4958132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp333924 
End bp335111 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID640179485 
Producthypothetical protein 
Protein accessionYP_001111693 
Protein GI134298197 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCTAA AACAATTACT AAAAATGATT TTTTCAAATA TTACCCAAAA CAAGGTGCGA 
ACCTTCCTAA CGACCCTGGG AGTAATCGTG GGTACCGCCA CCATATTTTT AGTGGTGGCC
ATTGGGAAAG GTGCGGAAGC CCAGGTTAAC CAGCAATATT CCAAACTTAA CGTCGGGACC
ATCATTGTAA TGCCCGCTAC AAGGGGAAAA GTAGCTGACC CGTTAACGAA AAAAGATGCC
CAATTGTTTT TGGAAAGTGA GAATATTACC CAAGCCTTTC CGATGTTACG TGGTAACGGC
GATATCAACT ATAACAATTA TTCAACCAGT GGGAGCTTTA TGGCAATCCA ACCAGCGTTT
CAAGGAAGTA ACAACCTAAC GATAGAACAG GGGAGAGCCT TTGAAGAAGA GGATGAGCAG
AAAAGAAACA AATGCGTCGT CATCGGAGCA GAGTTAGCCA ATACCCTTAC AGAAAACAAT
CCTTCAGAAC TACTGGGTCA AAGCGTGAGT ATTAACAACA GGAAATTTGA AGTGATTGGA
ATTTACAATC GCGTGGGGGA TTCTGGTTCG GGCATGAGCT ATGATGATGC TGCCTTTGTA
CCTTATTCGG CCGGGGAGAG ATTTTTACTG GGCACCCGAG CAAACCCCAC CATCAACGTT
CAGGCCAAAG ACATTGATTC TGTGCAATCT GCCATTGAGG ATATTACCAA TATTTTGAAT
GACAATCACC GTGCTGGGGG AGCAGATCAG TTTCGTATTA TGGATGCTGG CAGCAGACTG
GCAGCAGCCC AGGAATCTGC TAAATCCATG TCATTGCTCT TGCTGGCGGT GGCAGCGGTG
GTCTTAGTTG TTAGCGGTAT CGGTATCATG AATGTGATGT TTGTGACAGT ACGAGAAAGA
ACCCGGGAAA TCGGCACCCT AAAGGCTATC GGGGCCAAGA AACAGGAAAT ATTAAACCAG
TTCCTCATCG AAGCCGTTAT TATCAGCCTA GCCGGGGGAA TCATCGGCGT CATCATGGGT
TTTCTAGCCT TGCCTGTATT ACGATATTTT GGGCAAAACG TCATTGCCTC GGTAAACGGC
GTCTTATTCG GACTTGTTTT TTCAGTGGTT ACAGGAGTAT TCTTTGGTTT TTACCCGGCC
TGGAAGGCGG CAGATTTAAG TCCCCTTGAA GCATTACGCT ATGAATAA
 
Protein sequence
MKLKQLLKMI FSNITQNKVR TFLTTLGVIV GTATIFLVVA IGKGAEAQVN QQYSKLNVGT 
IIVMPATRGK VADPLTKKDA QLFLESENIT QAFPMLRGNG DINYNNYSTS GSFMAIQPAF
QGSNNLTIEQ GRAFEEEDEQ KRNKCVVIGA ELANTLTENN PSELLGQSVS INNRKFEVIG
IYNRVGDSGS GMSYDDAAFV PYSAGERFLL GTRANPTINV QAKDIDSVQS AIEDITNILN
DNHRAGGADQ FRIMDAGSRL AAAQESAKSM SLLLLAVAAV VLVVSGIGIM NVMFVTVRER
TREIGTLKAI GAKKQEILNQ FLIEAVIISL AGGIIGVIMG FLALPVLRYF GQNVIASVNG
VLFGLVFSVV TGVFFGFYPA WKAADLSPLE ALRYE