Gene Dred_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0308 
Symbol 
ID4958334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp322805 
End bp323239 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content33% 
IMG OID640179473 
ProductMarR family transcriptional regulator 
Protein accessionYP_001111681 
Protein GI134298185 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000768175 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG GAAATGCCCT TTCCATAATA AGCAGAATAA GAGAAAAGGC AACTAAATTA 
ATTATTAGAG AACTAGAAAG TCACGGAGTT GAAGGGATCG TTCCTTCTCA TGGAGATATT
TTAGTTATTC TTTTTCATGG TGAAAAATTT ACTATGAAGG AGTTAGCAGC TAAAATCCAT
CGAACAAAAC CTACTGTTAC AGTATTAATA GAAAAGCTAG TACAATACGG TTTTGTAGAG
AAGGAAAAAA GCCACACGGA TAGTAGAGTT ACCTATATAA AATTAACCAA GAAAGGATTT
GAGTTAAAAC CAATCTTTGA TGATATTTCC GCAAAACTTA ATGGTATACT CTACGGAGAC
TTAACTGAAG AAGAATCAGA GGCCCTTGAA AGGTTACTGA ATGATGTTAA CTCTAGATTT
GATGCACAAA AATGA
 
Protein sequence
MRKGNALSII SRIREKATKL IIRELESHGV EGIVPSHGDI LVILFHGEKF TMKELAAKIH 
RTKPTVTVLI EKLVQYGFVE KEKSHTDSRV TYIKLTKKGF ELKPIFDDIS AKLNGILYGD
LTEEESEALE RLLNDVNSRF DAQK