Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0253 |
Symbol | |
ID | 4957454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 254189 |
End bp | 255379 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640179419 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_001111627 |
Protein GI | 134298131 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.208201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCGG ATCATAGAGG TTATTTTGGC CCTTACGGTG GTGCCTTCGT GCCAGAAACA CTGATGCCTG CACTGGAAGA ACTAATCCAG GCTTACGGGG CAGCCAGTGA GGATGAAGAA TTTTTAAAGG AGGTAACATA TTATTTAAAT GATTATGTAG GACGGCCATC TCCTATTTAT TTTGCCCGTG CCCTCAGTGA GGGGACCGGG GGAGCCAAGA TTTTTCTGAA GAGAGAGGAT CTAAATCATA CCGGCGCCCA TAAAATTAAC AATACCATCG GACAACTGCT GCTGGCCCGG CGGATGGGTA AAAAACGAAT CGTAGCAGAA ACCGGGGCGG GGCAGCATGG TGTGGCCACC GCTACGGTTT CTGCCATGCT GGGTATGCAA TGTGTTGTCT ATATGGGTGA AGAAGACATC CGACGCCAGG CCCTTAATGT ATTTCGTATG CGCTTACTGG GGGCAGAGGT GGTTAAGGTC AGTTCTGGTA CTGGAACATT AAAGGATGCT ATGAATGAAG CCATGAGGGA CTGGGTTACA AATGTAAGGA ATACTTTCTA TGTGATTGGT TCGGTGGCGG GACCACACCC TTATCCTAAA ATGGTAAGGG ACTTCCAATC CATTATTGGT CGAGAAGCCC GGGAACAAAT GCTCAAAAAA ACCGGCAGAC TGCCTGATTA TGTGGTGGCC TGTGTAGGTG GCGGTAGTAA TTCCATGGGT ATTTTTTATC CATTCTTAGA AGATCAAGAA GTCCATTTAG TTGGGGTAGA AGCAGGGGGG CTGGGGTTGT CTTCCGGGCA ACATGCAGCC CCTCTCACAG TTGGACGGCC TGGGGTTTTG CATGGCTCCT ATAGTTATTT AATGCAGGAC TCCCACGGCC AAGTTCACTC GGTTTATTCC ATATCGGCGG GGCTGGATTA TCCGGGGGTT GGTCCGGAGC ACAGCTACCT AAGGGATGCT GGGAGAGTCC GCTACACGGT GGCCACCGAT AAAGAAGCCC TGGAGGCCTT CCATTTACTT TGCCGAACCG AAGGAATCCT GCCAGCCCTG GAGAGTTCCC ATGCACTGGT GGAGGCCGTA AAATTAGCCA AGGTACTGGA CAATAGCCAC AACATTCTGG TTTGTTTATC TGGGCGAGGA GATAAAGATG TTCATACAGT TGCCGAGGGA ATGGGGGAAG AACTGGTATG A
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Protein sequence | MQPDHRGYFG PYGGAFVPET LMPALEELIQ AYGAASEDEE FLKEVTYYLN DYVGRPSPIY FARALSEGTG GAKIFLKRED LNHTGAHKIN NTIGQLLLAR RMGKKRIVAE TGAGQHGVAT ATVSAMLGMQ CVVYMGEEDI RRQALNVFRM RLLGAEVVKV SSGTGTLKDA MNEAMRDWVT NVRNTFYVIG SVAGPHPYPK MVRDFQSIIG REAREQMLKK TGRLPDYVVA CVGGGSNSMG IFYPFLEDQE VHLVGVEAGG LGLSSGQHAA PLTVGRPGVL HGSYSYLMQD SHGQVHSVYS ISAGLDYPGV GPEHSYLRDA GRVRYTVATD KEALEAFHLL CRTEGILPAL ESSHALVEAV KLAKVLDNSH NILVCLSGRG DKDVHTVAEG MGEELV
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