Gene Dred_0232 details

Gene Information

• Locus tag: Dred_0232
• Symbol: rpsE
• ID: 4958027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 239905
• End bp: 240405
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640179398
• Product: 30S ribosomal protein S5
• Protein accession: YP_001111606
• Protein GI: 134298110
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0010623
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAGAA TTGATGCCAG CAAGCTGGAA CTAACCGAAA AGGTTGTGTA TATAAACCGT 
GTTGCCAAGG TAGTTAAGGG TGGTCGGCGC TTTAGCTTCT CCGCTCTGGT GGTAGTTGGC 
GACGGTAACG GACACGTGGG TGCCGGTCTA GGTAAAGCCG CAGAAGTTCC CGAAGCTATC 
CGCAAGGGAA TTGAAGACGC TAAGAAGAAC ATGATTAAAG TTCCCTTAAA TGGAACTACC 
ATTACTCACC AGATCCAAGG TCGTTTCGGA GCAGGAAAAG TACTGATGAA GCCAGCTGCC 
AAAGGTACTG GTGTTATTGC AGGTGGTCCT GTACGTGCCA TCCTGGAATT AGCAGGTGTA 
AGGGACATCT TAACCAAATC CCTTGGCACC AACAATGCTA ACAACATGGT AAATGCTACC 
ATGGAGGGAC TTAAGCAGCT TAAGACCCCT GAAGAAGTAG CACGTTTACG GGGTAAAACC 
GTAGAAGAAT TATTAGGTTA G 

 

Protein sequence

MARIDASKLE LTEKVVYINR VAKVVKGGRR FSFSALVVVG DGNGHVGAGL GKAAEVPEAI 
RKGIEDAKKN MIKVPLNGTT ITHQIQGRFG AGKVLMKPAA KGTGVIAGGP VRAILELAGV 
RDILTKSLGT NNANNMVNAT MEGLKQLKTP EEVARLRGKT VEELLG