Gene Dred_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0199 
Symbol 
ID4956277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp214459 
End bp215661 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID640179365 
Productelongation factor Tu 
Protein accessionYP_001111573 
Protein GI134298077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000189275 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGG CTAAATACGA ACGTACGAAA CCCCACGTAA ACATTGGTAC CATTGGTCAC 
GTTGACCATG GCAAAACCAC CCTGACTGCT GCCATTACCG TAGTTCTGTC TACTTCTGGC
GGTGCCTCTG TTAAGCGTTA TGATGAAATT GACAACGCCC CTGAAGAGCG TGAGCGCGGC
ATCACCATTA ACACCGCCCA CGTAGAATAT GAAACCGCAA ACCGTCACTA TGCACACGTT
GACTGCCCCG GTCACGCTGA CTATGTTAAG AACATGATCA CCGGTGCTGC TCAGATGGAC
GGTGCTATCC TAGTTGTATC CGCCGCTGAC GGCCCGATGC CTCAAACCCG TGAGCACATT
CTGCTGTCCC GTCAGGTAGG CGTTCCTTAT ATCGTAGTAT TCCTGAACAA GTCTGACATG
GTTGACGATG AAGAACTGCT CGAACTGGTA GACATGGAAG TTCGCGAACT GCTGAACTCC
TATGAGTTTC CTGGCGATGA CACTCCCATC GTAGCTGGCT CTGGTCTAAA AGCTCTGGAA
TGTGGCTGCG GTAAGCGCGA GTGCGAGTGG TGTGGCAAAA TCTGGGAGTT AATGGACAAT
GTAGACGCCT ACATTCCTAC CCCTGAGCGT GCTGTAGATA AGCCATTCCT GATGCCTGTG
GAAGACGTGT TCTCCATCAC TGGTCGTGGT ACCGTTGCTA CTGGTCGTGT AGAGCGTGGT
CAAGTAAAAG TACAAGACGA AGTAGAAATC GTTGGTCTGA ACGAAAAGCC TCGTAAGACC
GTTGTAACCG GTGTAGAAAT GTTCCGTAAG CTGCTGGACT TTGCACAAGC TGGTGACAAC
ATTGGTGCTC TGTTGCGAGG TGTAGACCGT AAAGAAATCG AACGCGGTCA AGTATTAGCT
AAACCCGGCA GCATTAACCC CCACACCAAG TACAGTGCTG AAGTATACGT TCTGACTAAA
GAAGAAGGTG GCCGTCATAC TCCTTTCTTC AACGGTTACC GTCCTCAGTT CTACTTCCGT
ACCACCGACG TTACCGGTAT CGTACAACTG CCTGAAGGTG TAGAAATGGT AATGCCTGGC
GACAACATTA AAGTAGATGT AGATCTTATC ACCCCCATCG CTATTGAAGA AGGTCTTCGC
TTCGCTATTC GTGAGGGTGG CCGTACCGTT GGTGCCGGTG TTGTAACTGG TATTAGAGAA
TAA
 
Protein sequence
MAKAKYERTK PHVNIGTIGH VDHGKTTLTA AITVVLSTSG GASVKRYDEI DNAPEERERG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKSDM VDDEELLELV DMEVRELLNS YEFPGDDTPI VAGSGLKALE
CGCGKRECEW CGKIWELMDN VDAYIPTPER AVDKPFLMPV EDVFSITGRG TVATGRVERG
QVKVQDEVEI VGLNEKPRKT VVTGVEMFRK LLDFAQAGDN IGALLRGVDR KEIERGQVLA
KPGSINPHTK YSAEVYVLTK EEGGRHTPFF NGYRPQFYFR TTDVTGIVQL PEGVEMVMPG
DNIKVDVDLI TPIAIEEGLR FAIREGGRTV GAGVVTGIRE