Gene Dred_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0197 
Symbol 
ID4955805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp212121 
End bp212633 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content43% 
IMG OID640179358 
Producthypothetical protein 
Protein accessionYP_001111571 
Protein GI134298075 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000225035 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGATT TTTATGTGGT GGACGGATAT AACATTATTC ACGCTTGGCC GGAATATGAA 
AACATGATTG GGACTGGATT AGACCATTGC AGAGATCGGC TTATCGATAT CCTTGCCAAC
TTTGCCGGGC TTGATGGCAG TTCTGTAACT GTGGTCTTTG ATGCTCACCT AGTCAAAAGC
GGCATGGGCC ACCACGAAAT AATTCATGGC ATAGAAGTGT ATTATACCCA GGAAGGGGAA
ACGGCCGATT CATTAATTGA AAGAATTGTG GGGGATTTAG GGAAGCAAGG GAATGTCTAT
GTAGTTACTT CGGACTGGGA TGAACAAAAA GTAATTTTTG GCAGGGGTGC TTACCGCCTA
ACACCTAAGG AATTTCGGAC TCAGGTACTA AAGACCAATA AGCGAGGGCG GGAGGACTAT
AATAAACCAA ACCCCACAGA GGGTTATCTG GAAGACAAAT TACCTAATGA CATCAGGATA
ATACTAGAAA AATGGCGTCG TAGAAAAAAC TAA
 
Protein sequence
MRDFYVVDGY NIIHAWPEYE NMIGTGLDHC RDRLIDILAN FAGLDGSSVT VVFDAHLVKS 
GMGHHEIIHG IEVYYTQEGE TADSLIERIV GDLGKQGNVY VVTSDWDEQK VIFGRGAYRL
TPKEFRTQVL KTNKRGREDY NKPNPTEGYL EDKLPNDIRI ILEKWRRRKN