Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0196 |
Symbol | |
ID | 4956281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 211382 |
End bp | 212113 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640179357 |
Product | RNA methyltransferase |
Protein accession | YP_001111570 |
Protein GI | 134298074 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000588208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA TGATTGCCGG CAGAAACCCG GTGCGGGAGG CTCTCCGTGC AGGGCGACCC ATTAATAAAG TAGTGATGGC AAAGGGCGCC GGCACCGGTC CTTTGGCAGA AATAGTAAAA CTGGCCAAAC AAAATAATAT ACCCCTGCAA ATGGTGGAGC GGAGTCACTT AGACAAAATG AACCCAGGCG TGCCACACCA AGGAGTTATT GCCTATGCAG CGGCAAAGCA ATATGTGGAG TTAGAAGAAC TATTGGAGAT TGCCAGGGCT AAGGGCCAAG ACCCTTTTAT CATTATGTTG GATGAAATAA ATGATCCACA TAACCTGGGC GCTATAATGA GGACCGCAGA TGCAGCAGGG GCCCATGGCG TGATTATTCC CCAGAGGAGG TCCGTAGCCC TAACCTCAAC CGTTGCAAAG GCTTCGGCTG GTGCAGTGGA ATATGTACCT GTGGCCCGGG TTACCAATTT GGATCAAACC ATTCGACAGT TAAAGGACGA AGGGCTTTGG GTTGTGGGTG CCGACATGGA CGGTTCGGAG ATTTACTGGG ATGCCAAACT AACAGGGCCT CTGTTGCTGG TTATTGGAGG AGAGGGCAAG GGTCTTGGCA GGTTAATAAA AGAGCGGTGC GACATGTTGG TGCGTTTGCC AATGGCGGGT CGTGTTGGAT CACTTAACGC CTCTGTGGCA GCTGCATTGC TTGTATATGA GGTGGTGCGC CAGAGAAGGT AG
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Protein sequence | MNEMIAGRNP VREALRAGRP INKVVMAKGA GTGPLAEIVK LAKQNNIPLQ MVERSHLDKM NPGVPHQGVI AYAAAKQYVE LEELLEIARA KGQDPFIIML DEINDPHNLG AIMRTADAAG AHGVIIPQRR SVALTSTVAK ASAGAVEYVP VARVTNLDQT IRQLKDEGLW VVGADMDGSE IYWDAKLTGP LLLVIGGEGK GLGRLIKERC DMLVRLPMAG RVGSLNASVA AALLVYEVVR QRR
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