Gene Dred_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0196 
Symbol 
ID4956281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp211382 
End bp212113 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID640179357 
ProductRNA methyltransferase 
Protein accessionYP_001111570 
Protein GI134298074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000588208 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA TGATTGCCGG CAGAAACCCG GTGCGGGAGG CTCTCCGTGC AGGGCGACCC 
ATTAATAAAG TAGTGATGGC AAAGGGCGCC GGCACCGGTC CTTTGGCAGA AATAGTAAAA
CTGGCCAAAC AAAATAATAT ACCCCTGCAA ATGGTGGAGC GGAGTCACTT AGACAAAATG
AACCCAGGCG TGCCACACCA AGGAGTTATT GCCTATGCAG CGGCAAAGCA ATATGTGGAG
TTAGAAGAAC TATTGGAGAT TGCCAGGGCT AAGGGCCAAG ACCCTTTTAT CATTATGTTG
GATGAAATAA ATGATCCACA TAACCTGGGC GCTATAATGA GGACCGCAGA TGCAGCAGGG
GCCCATGGCG TGATTATTCC CCAGAGGAGG TCCGTAGCCC TAACCTCAAC CGTTGCAAAG
GCTTCGGCTG GTGCAGTGGA ATATGTACCT GTGGCCCGGG TTACCAATTT GGATCAAACC
ATTCGACAGT TAAAGGACGA AGGGCTTTGG GTTGTGGGTG CCGACATGGA CGGTTCGGAG
ATTTACTGGG ATGCCAAACT AACAGGGCCT CTGTTGCTGG TTATTGGAGG AGAGGGCAAG
GGTCTTGGCA GGTTAATAAA AGAGCGGTGC GACATGTTGG TGCGTTTGCC AATGGCGGGT
CGTGTTGGAT CACTTAACGC CTCTGTGGCA GCTGCATTGC TTGTATATGA GGTGGTGCGC
CAGAGAAGGT AG
 
Protein sequence
MNEMIAGRNP VREALRAGRP INKVVMAKGA GTGPLAEIVK LAKQNNIPLQ MVERSHLDKM 
NPGVPHQGVI AYAAAKQYVE LEELLEIARA KGQDPFIIML DEINDPHNLG AIMRTADAAG
AHGVIIPQRR SVALTSTVAK ASAGAVEYVP VARVTNLDQT IRQLKDEGLW VVGADMDGSE
IYWDAKLTGP LLLVIGGEGK GLGRLIKERC DMLVRLPMAG RVGSLNASVA AALLVYEVVR
QRR