Gene Dred_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0164 
Symbol 
ID4955803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp172354 
End bp173940 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content46% 
IMG OID640179317 
ProductL-aspartate oxidase 
Protein accessionYP_001111538 
Protein GI134298042 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAAACC GATACCTGGT TAATTTTGAC TCCAGGGAAT TACCCCAACA GGAAGCAGAG 
TATTTGATCA TAGGCGGGGG TATTGCAGGG CTTTTTACTG CTTGGGCGGC AGCAAAATCC
GGTGCACAAA TAACTCTCCT GACAAAACGC ACGGTGGCCG AAAGTAATAC CGATAGGGCT
CAGGGTGGTA TTGCTGCCGC ATTGGGTCAG CATGATTCCC CAGCATTACA TATGCAAGAT
ACATTAATTG CCGGGGCTGG TCTATGTGAT GAAGATGCTG TTAGAATATT GGTAAACGAA
GGACCCGAGA GAGTAAAGGA ATTAATTAAA ATGGGTGCAT CCTTTGATCG AACAGGAGAA
GATCTTTGTT TCACCAGAGA AGGTTGCCAT AGCCAACATC GGATCCTTCA TGCACAGGGT
GACGCTACCG GAGCGGAGAT TTTACGTGCC CTATATCAAA ATGTATCCTC ATTGTCTAGT
GTAGAGATTA TTGAAAATCA GTATGTTGTT GACCTGCTGG TCAAAAATAA TGTATGTTAC
GGTGCTCTGG CTATGGATCA AATTACCGGC CAATTTCGTG TTTTTAGGGG TAAAATCGTT
GTTTTGGCCA CTGGAGGGTC TGGACGGTTA TATAACTATA CCACAAACCC CGAAGTTGCT
ACAGCTGACG GAATTGCCTT AGCCTACAGA GCTGGTGCTG AAGTCATGGA CATGGAGTTT
ATTCAGTTTC ATCCCACTTC ATTGGTTTTA CCAGATGCAC CCCGCTTTTT AATTTCGGAG
GCTGTAAGAG GAGAAGGGGC TCTACTGCGA AATTCTTGGG GGGAAAGGTT TATGGCCCAA
TATCATGGTA TGGCGGAGCT TGCCCCCCGA GATATAGTAT CCCGTGCGAT TTTAAGTGAA
ATGGCTAGGA CAAGGGCTAA TTCTGTTTTT CTTGATCTGA CTCACTTAGA TCCCGATAAA
ATTAAGGAAC GTTTTCCGAC TATCACACAA ACCTGTTCCA AATACGGCGT AGATATTGCC
CGGGAATTTA TTCCAGTTGC CCCGGCGGCC CACTATATGA TGGGTGGGGT GAAAACGGAT
CTCTGGGGAG AAACAAGTAT CCAACGCTTA TTCGCTTGCG GTGAAGCCAG TTGCATGGCA
GTCCACGGTG CAAATAGACT GGCCAGCAAC TCATTGTTGG ATGGTCTGGT CTGGGGCGGG
CGTATTGTGG CAAGGGCCAA CCATGTCCTA GAAGAAAGAT TACCCGAGGA AACAGAGTTC
TTCTGTCAAG ATTTGCTGAC AACTCCTGAA GAAGACTTTA TCGACCTAAG GAAAGAGATA
CAGCATATTA TGGGAGACAA AGTAGGTCCA TTACGGACCG CCCAGCGACT AGCCCAAGCA
CTGGCATTCT TTGAACGTTG GTCATATTTA ACCAAGCATG AAGTTAGGGA TACAGCAAAA
ATGGAAGTGC GAAACATGCT GGAGGTTGGG GCATTGATAG CTGAGGCCGC AATGATGCGG
AGTGAAAGCA GAGGAGGCCA TTTTCGCTTA GATTATCCCG AGACATCAGA GCGGTGGCAA
AAGCATATTA TTCTTAAGGG TAATTAA
 
Protein sequence
MTNRYLVNFD SRELPQQEAE YLIIGGGIAG LFTAWAAAKS GAQITLLTKR TVAESNTDRA 
QGGIAAALGQ HDSPALHMQD TLIAGAGLCD EDAVRILVNE GPERVKELIK MGASFDRTGE
DLCFTREGCH SQHRILHAQG DATGAEILRA LYQNVSSLSS VEIIENQYVV DLLVKNNVCY
GALAMDQITG QFRVFRGKIV VLATGGSGRL YNYTTNPEVA TADGIALAYR AGAEVMDMEF
IQFHPTSLVL PDAPRFLISE AVRGEGALLR NSWGERFMAQ YHGMAELAPR DIVSRAILSE
MARTRANSVF LDLTHLDPDK IKERFPTITQ TCSKYGVDIA REFIPVAPAA HYMMGGVKTD
LWGETSIQRL FACGEASCMA VHGANRLASN SLLDGLVWGG RIVARANHVL EERLPEETEF
FCQDLLTTPE EDFIDLRKEI QHIMGDKVGP LRTAQRLAQA LAFFERWSYL TKHEVRDTAK
MEVRNMLEVG ALIAEAAMMR SESRGGHFRL DYPETSERWQ KHIILKGN