| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0147 |
|---|
| Symbol | |
|---|
| ID | 4955781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 158549 |
|---|
| End bp | 159553 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640179300 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001111521 |
|---|
| Protein GI | 134298025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAA ACAAAAGCGA AACCGCGAGT TTACTGGACA AACTGGCAAA TGAATACCGA
GTGATTGCCC CGGTAGAAAA AGAAGGCCTG GTACAATTCG CAGCAATTCA AAAGGGTGAA
GAGGCCAAAC TAGACTACAT GAATGCCAAA AAACCTGGCA AAGAAATCCT TTTCCCTCAG
TCTGAAGAAC TGTATAGCTA TACAGTGGAT GCTGAAGGAG TAAGGATGCA AGATAACGTT
GATCCGAAGG CCACCATTGT ATTTGGTATG CGCCCCTGCG ACGTAAAATC CATGGTACTA
TTGGACAATG TGTTTAAAAA TGATCAATAT GAAGATGTAT ACTACCTGAC TCGTCGGGCC
AATACCCTGA TCGTGGGACT GGGCTGTAAT GAACCGTCAG CCACCTGTTT CTGCAGCAGC
ATGAGCTGTG GTCCCTTTGC CAAAGAAGGA AGCGATATCT TCCTGACAGA CATTGGAGAG
GCCTACGTGG TAGAAGGCAT CAGCGAAAAA GGAAAAGAAT TATTGGCCAA ACTGGGCTTA
GCCGAAGCCA GTGCAGAAGC AAAGGGTCAA GCGGCCAAAC TGCAAGAAGA AACCAAGGCA
GATGGCAGCG TTAACATTGA AGGTCTGGCA GAAAAACTGG GCGGCATGTT TGAACATCCA
TACTGGGATA GCCTGTATGA AAAATGCCTG GGCTGCGGAG CCTGCACCTA CCTGTGTCCC
ACCTGCCACT GTTTTGACAT AGCAGATGAA GCCACAGATT GCAACGGCTG CCGGGTAAGA
AACTGGGATG CCTGCATGTT CCCGCTATTT ACCCTGCATG GTTCCGGTCA CAACCCAAGA
CCGGGTGGAA AGGCTCGTTG GAGACAAAGA CTCATGCACA AATTTAACTA CTTTGTAGAA
CGCTACAATG CCACAGCCTG TGTTGGTTGC GGTAGGTGCA TCAAAAACTG TCCTGTAAAC
CTGGATATTC GCCAAGTATT GGCCGATGTC CGGGCGTTGG ACTAG
|
|---|
| Protein sequence | MILNKSETAS LLDKLANEYR VIAPVEKEGL VQFAAIQKGE EAKLDYMNAK KPGKEILFPQ
SEELYSYTVD AEGVRMQDNV DPKATIVFGM RPCDVKSMVL LDNVFKNDQY EDVYYLTRRA
NTLIVGLGCN EPSATCFCSS MSCGPFAKEG SDIFLTDIGE AYVVEGISEK GKELLAKLGL
AEASAEAKGQ AAKLQEETKA DGSVNIEGLA EKLGGMFEHP YWDSLYEKCL GCGACTYLCP
TCHCFDIADE ATDCNGCRVR NWDACMFPLF TLHGSGHNPR PGGKARWRQR LMHKFNYFVE
RYNATACVGC GRCIKNCPVN LDIRQVLADV RALD
|
|---|
| |