Gene Dred_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0142 
Symbol 
ID4956778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp152407 
End bp153663 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content44% 
IMG OID640179295 
Producthypothetical protein 
Protein accessionYP_001111516 
Protein GI134298020 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGA ATGCCAAGGT CCAAGAACCC GAAGTTATTA ATTTCTCTAA CATGGATCCC 
AAATTTAGAG ATGAAGTGAT GGAAAAACTT AAAAATATTG ATTGGACTCA GTGCTTGGCC
TGCGGAATGT GCACTGCCGG CTGTCCCTAC GCTGATGTTC ACGGGAACAA TGACCCCCGT
AAGTTCCTGC GTAAGCTGGT ACTGGGACTT CGCGAAGAGG CTCTCAAAGA TCCTTTCATT
TGGAATTGTA CAGTCTGTGA GCGTTGTACT GTTGAATGCC CCATGGGTAT AAACTTCGGT
ATTATTACCC GTGGTATGAG GGGTCAATTT GGTATTCCCA CGCCTGGATT TATGGATAAG
GTTGTTAATG AACACATTCA TTCTGGTAAC CAGATGGATG TTCCTCAGGA TGAATATCAA
GAAACCATTG AGTGGATTGA GGAAGAACTG CAGGAAGAAT TAGGCGATCC TAATTATAAA
GTTAATGTTG GTAAAAAGGG TGCAGAGTTT ATCTTTGGCC TGAATGCCCG TGAAATTAAA
TACTACTCCC ATGAATTACA AGAAATCCTT AAGGTGTTCT ACTATGCCAA GGCCGATTAT
ACCCTGGGTG AGCACCGTTG GGACTGCACA AACTTGGCAT TATTCAGTGG GAAAAACGAC
GATTTCTGTG AAATTCAGCG TCCCTTCTTT GAAGAAGCAG TTCGCTTGGG TGTAAAGAAA
ATTGTTGTTA CCGAGTGTGG CCACGCCTAT AAGTCAACTC GTTTGTTTGA CGAAAAATTC
TGGGATGGTC CCAAGCTTCC CATTCTCAGT GTTTTGGAAG TTTACGATGA GTGGATTAAA
AATGGTACAC TGAAAGTAGA TCCCAGTCGT AACCCTGAAC CTTGCACCGT GCACGATCCC
TGTAACTTGG TACGTAAATC CGGTGTTTTA GATGCTAACC GTAACGTTAT GAACGCCATT
TGCTCCGATT TCCGTGAGAT GTATCCCAAT CGTCAGTACA ACTACTGCTG CGGTGCTGGT
GGTGGCGCTC TGGCCGTACC TGAACAAAAA TCCATGCGGA TGGAAAAGGC CAGAAGGAAG
ATTGAGCAAA TTGACGCCAC TGGAGCAACC ACTGTTGCTA TTCCTTGTCA CAACTGTATG
GACCAGTTTA CTGACATGAA TAAGGAATAC AAGAAGGGCT GGAAGTGTAC CCATATTACA
CCGCTCTTGG CAAAGGCAAT CATTCTTCCC GACTGGGCTA AAAAAGAAGA AGAGTAG
 
Protein sequence
MSENAKVQEP EVINFSNMDP KFRDEVMEKL KNIDWTQCLA CGMCTAGCPY ADVHGNNDPR 
KFLRKLVLGL REEALKDPFI WNCTVCERCT VECPMGINFG IITRGMRGQF GIPTPGFMDK
VVNEHIHSGN QMDVPQDEYQ ETIEWIEEEL QEELGDPNYK VNVGKKGAEF IFGLNAREIK
YYSHELQEIL KVFYYAKADY TLGEHRWDCT NLALFSGKND DFCEIQRPFF EEAVRLGVKK
IVVTECGHAY KSTRLFDEKF WDGPKLPILS VLEVYDEWIK NGTLKVDPSR NPEPCTVHDP
CNLVRKSGVL DANRNVMNAI CSDFREMYPN RQYNYCCGAG GGALAVPEQK SMRMEKARRK
IEQIDATGAT TVAIPCHNCM DQFTDMNKEY KKGWKCTHIT PLLAKAIILP DWAKKEEE