Gene Dred_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0139 
Symbol 
ID4956695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp149549 
End bp150493 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content49% 
IMG OID640179292 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001111513 
Protein GI134298017 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CCGAAAGTAT TAGAGAAACC GCCAAGAAAC TACTGGCAGA AAAGAAAGTA 
GACCTAGTGG TGGGATTTGC CCAAGGTAGC CTGCCCCTCC GCAGCACCCC GTACTTTGCG
AGGACACCGG AAGAGGCAGA AAAGCTCATC TGGAGCGCCA CCTGTGAAAA CAACCTGGCC
AACTTTGTAC GCAAGCGTAC CGAAAAAGTA GCGGTAATCG CCAAGGGCTG CGATGTACGA
GCCATTGTGG GATTGATCAA AGAAGGCCAA GTAAACAGGG AAAACCTAAC CATCATCGGT
GTACCCTGTG AAGGAATGGT AGACCGTAAA CAAATCTGTC AGGCAGTGGG ATGCAAAGAA
ATCCTGGAAG CAACCGACAC CGGAGCAGAA CTGGTACTCA AAGGAAAAGA CTTTGAAAAG
ACAGTAGCCA AAGCCGAAGT TATGTTTGGC TCCTGCAAAA CCTGCCAATA CAACAACCCA
GTAATCTTTG ACGAACTAAT TGGCGAACAA GTAGAAGTAA AAGAAGCAAA CTATGCGGAT
ATTGAAGCCT TTGAAGCCTT GAGTGACGAA GAACGTGCAG CATTCATAGC CAAAGAAATG
GAAAAATGCA TCCGTTGCTA CGCCTGTCGG CAGGCCTGCC CCATGTGCTA CTGCAGCGAA
TGCTTCGTAG ACTGCGGCGC CCCTGCCTGG ATTGGTAAAA GTGCCGCCAA CGTAGATGAC
AATGCCCTGT TCCAGGCGGT AAGAGTACTG CACCTGGCAG GACGTTGCGT GGACTGTGGT
GCCTGTGAAA GAGCTTGTCC CATGGGCATA AAACTGTCCC TGCTAAACCG CAAGATGGTG
AAGGATGTAA AAGAACTGTT TGGTGCAGAA GCCGGCGTAA ACCTAGAAGA TCCCCCGGCC
CTAAACACCC ATAAGTTCGA AGATAATGAA GACTTCATGC TATAG
 
Protein sequence
MNKTESIRET AKKLLAEKKV DLVVGFAQGS LPLRSTPYFA RTPEEAEKLI WSATCENNLA 
NFVRKRTEKV AVIAKGCDVR AIVGLIKEGQ VNRENLTIIG VPCEGMVDRK QICQAVGCKE
ILEATDTGAE LVLKGKDFEK TVAKAEVMFG SCKTCQYNNP VIFDELIGEQ VEVKEANYAD
IEAFEALSDE ERAAFIAKEM EKCIRCYACR QACPMCYCSE CFVDCGAPAW IGKSAANVDD
NALFQAVRVL HLAGRCVDCG ACERACPMGI KLSLLNRKMV KDVKELFGAE AGVNLEDPPA
LNTHKFEDNE DFML