| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0126 |
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| Symbol | |
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| ID | 4956344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 132169 |
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| End bp | 134016 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640179280 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001111501 |
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| Protein GI | 134298005 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0860215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGGAG GAGTGACATT TTTGAATAAG GTTCTTAAAA ACCTTAGCAT TTACCTGTTG
ATTGTACTGG TTATCATATT TTTGATCCAG TTTACGGGAG ACAAAAAAAC CGCCGTTGTG
ACTTTGCGAT ACGATCAGTT TATTACTGCT CTGGAACAAA ACAAGGTCCA GAGTGTGGAA
ATGACAACGG ATAAATCCAC CAATATTATT ATTGGTAAAC TCAAAGATGG TCGGGATTTT
GAAACCAACG GTCCAATATT GGATGATACA ATCATCCCGA TGTTGCGGGA AAAGGATGTT
CAGTATAAAC AAGCATTGCC ACCGGAACCG TCTTGGTGGA CCGGATTGTT AACAACCCTA
TTACCCATCC TTGTTTTTGT AATGCTATTC TTCTTTATGA TGCAACAAAG CCAAGGTGGC
GGTAATCGTG TGATGTCCTT TGGTAAAAGT AAGGCCAAAT TACATACGGA TGAAAAAAGA
AAAGTAACCT TTGAGGACGT TGCAGGGGCA GACGAGGTTA AGGAAGAACT AGCAGAAATT
GTAGATTTCT TAAAAAGTCC AAAGAAGTTT AATGAAATTG GAGCTAAGAT TCCCAAGGGG
GTCCTATTAT TTGGGCCTCC TGGTACAGGT AAGACATTAT TGGCCCGGGC TGTGGCTGGA
GAGGCAGGGG TTCCCTTTTT CTCCATATCT GGTTCCGATT TTGTTGAAAT GTTTGTGGGT
GTGGGGGCTT CGCGCGTTCG GGATTTGTTT GAGCAAGCCA AGAAGAATGC GCCTTGCATT
GTTTTTATCG ATGAGATTGA CGCTGTGGGT CGCCAGCGGG GTGCCGGTTT AGGTGGTGGC
CATGACGAAC GTGAGCAGAC CCTAAACCAA TTGCTGGTGG AGATGGACGG ATTTAATCCC
AATGAAGGAA TTATCATTGT GGCAGCTACT AACCGCCCTG ATATCCTTGA CCCTGCACTT
CTGCGACCCG GTCGTTTTGA CCGTCAAGTT GTGGTAGATT CTCCAGATGT TAAGGGTCGT
GAAGAGATTT TGAAAGTCCA CTCCAAAGGG AAGCCCCTTG AAGAGAACGT AGACTTAGAA
GTTTTGGCCC GCAGAACTCC TGGTTTTACC GGAGCGGATT TGGCAAACTT AATGAACGAA
GCAGCACTGC TTTCAGCAAG GTCTGGTAAA AAGACCGTCG GTATGAACGA ATTGGAAGAT
TCCATTGAAC GGGTTATTGC AGGGCCAGAA AAGAAATCCA AGGTGATTTC TGAGAAAGAA
AAACGATTGG TATCCTACCA CGAAGCTGGT CATGCTTTAG TAGGATACCT GTTGCCTAAC
ACCGATCCCG TTCATAAAGT ATCAATTATT CCTCGTGGCC GAGCTGGCGG ATACACCCTT
TTGTTACCAA AGGAAGATCG TTATTATATG ACCAGATCCA TGTTACTGGA TCAAGTTGTT
ATGTTGCTGG GAGGACGGGT TGCTGAAGAT GTTGTGCTAA AGGAAATTAG CACCGGAGCA
CAAAATGATT TGGAGCGAGC CACCAGCATC ATTCGACGTA TGATTATGGA ATATGGTATG
AGTGATGAGC TTGGACCTCT TACTCTAGGA CATAAACAAG ATACTCCTTT TCTGGGCAGA
GATATTAATC GAGATCGCAA CTACTCTGAG GAAGTTGCCT TTGCAATTGA CCGTGAGGTT
CGTAAGATGA TCGATCAAGC ATATGGCAAG GCAAAGAAAC TCCTTACAGA ACATAGTGAT
ACCCTGGACA AAATTGCAAA GGTGCTTATG GATAAAGAAA CCATTGAAGC AGAAGAATTT
GCCCGGATTA TGAAGGAATC AGGCCTTGAT AAGCCGGCTC AACTGTAG
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| Protein sequence | MQGGVTFLNK VLKNLSIYLL IVLVIIFLIQ FTGDKKTAVV TLRYDQFITA LEQNKVQSVE
MTTDKSTNII IGKLKDGRDF ETNGPILDDT IIPMLREKDV QYKQALPPEP SWWTGLLTTL
LPILVFVMLF FFMMQQSQGG GNRVMSFGKS KAKLHTDEKR KVTFEDVAGA DEVKEELAEI
VDFLKSPKKF NEIGAKIPKG VLLFGPPGTG KTLLARAVAG EAGVPFFSIS GSDFVEMFVG
VGASRVRDLF EQAKKNAPCI VFIDEIDAVG RQRGAGLGGG HDEREQTLNQ LLVEMDGFNP
NEGIIIVAAT NRPDILDPAL LRPGRFDRQV VVDSPDVKGR EEILKVHSKG KPLEENVDLE
VLARRTPGFT GADLANLMNE AALLSARSGK KTVGMNELED SIERVIAGPE KKSKVISEKE
KRLVSYHEAG HALVGYLLPN TDPVHKVSII PRGRAGGYTL LLPKEDRYYM TRSMLLDQVV
MLLGGRVAED VVLKEISTGA QNDLERATSI IRRMIMEYGM SDELGPLTLG HKQDTPFLGR
DINRDRNYSE EVAFAIDREV RKMIDQAYGK AKKLLTEHSD TLDKIAKVLM DKETIEAEEF
ARIMKESGLD KPAQL
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