Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0105 |
Symbol | |
ID | 4958338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 110962 |
End bp | 111996 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640179259 |
Product | threonine aldolase |
Protein accession | YP_001111480 |
Protein GI | 134297984 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0310789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACCA TTCGAGTGGT AGATTTACGC AGTGACACCA TCACTTTGCC CACTGACGAA ATGAGAAAGG CCATGGCTAC CGCGGTGGTT GGTGACGATG TATACAAAGA AGACCCTACG GTAAACCAGT TGGAAGAAAC TGCCGCTTCT TTGCTTGGAA AAGAAGCAGC TCTTTTTGTT CCTTCTGGAA CCATGGGTAA CCAAATAGCA GTTTTAACCC ATACTGCCCG GGGTGAAGAG GTCCTTCTGG ACAGCGAAGC CCATATTTAT TACTACGAAG TGGGCGGTCC TGCCATGCTG GCCGGGGTGC AATTAAGACC GGTCAGTGAT TTATTAACAG ACCATGGCCC GGAAATTTTA AAGGGTTCCT TGCGGGGAGA AGATCTCCAT TTTCCTCATA CGTCATTAAT TTGTTTAGAA AATACCTTTA ATCGTGGTGG CGGCACCATC CTCTCTCCAC ACACCATGGG GAGGATTTAC TCAATTGCCC AGGAACATAA CCTAAAGGTC CACGTGGACG GTGCCCGTAT TTTTAATGCA GCCGTATCCC TCGGGGTAGA TGTTCGGACT TTTAGTCAGC ATTGTGATTC CCTCATGTTC TGTCTTTCAA AGGGCTTGGC TGCACCAGTG GGTTCTTTGC TGGTTGGTAC ACGGCAGTTT ATCGAACGAG CAAGAAAATA TCGCAAGGCT CTGGGGGGCG GCATGCGTCA AGCCGGTATT CTGGCTGCCG CTGGTTTAGT TGCTTTGCAG AATGTGGACA GGCTTGCAGA AGATCATGCC AACGCCCGGC GGTTGGCCGA AGGTCTGGCT AAATTACCGG GACTAGGTGT TGATTTGGCT AAAGTACAAA CCAATATCAT CGTTGTAAAT GTAAATCAGC CGCGCTCTGC AGCAGATTTA ACCATGGCAC TAAATAATAA AGGGATTAAA TGTTCCACCT TTGGTCCCTC CACCATCCGC ATGGTTACTC ATATAAATGT TTCTAAAGAG GATATAGACT ATGCCTTAGG CATTGCTAAA TATCTCTTGC AATAA
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Protein sequence | MITIRVVDLR SDTITLPTDE MRKAMATAVV GDDVYKEDPT VNQLEETAAS LLGKEAALFV PSGTMGNQIA VLTHTARGEE VLLDSEAHIY YYEVGGPAML AGVQLRPVSD LLTDHGPEIL KGSLRGEDLH FPHTSLICLE NTFNRGGGTI LSPHTMGRIY SIAQEHNLKV HVDGARIFNA AVSLGVDVRT FSQHCDSLMF CLSKGLAAPV GSLLVGTRQF IERARKYRKA LGGGMRQAGI LAAAGLVALQ NVDRLAEDHA NARRLAEGLA KLPGLGVDLA KVQTNIIVVN VNQPRSAADL TMALNNKGIK CSTFGPSTIR MVTHINVSKE DIDYALGIAK YLLQ
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