Gene Dred_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0066 
Symbol 
ID4956029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp73666 
End bp74439 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content47% 
IMG OID640179220 
ProductTatD family hydrolase 
Protein accessionYP_001111441 
Protein GI134297945 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0305827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATTG ATTCCCATGC CCACCTTGAT AACGAACGTT TTCTAGAAGA TCAGGCAGAG 
GTGATAGCCC GTTGTAAGGA AAAATTGACG GCAGTTATCA ATGTGGGATA TGATCTTGCA
TCTTCCCGGA GATCCCTTGA ACTGGCCGAG ACCTACCCAT TTATTTATGC TGCGGTGGGT
GTACACCCCC ATGACGCAAA GGAAGCTTCG GGGAATTATT TACACCAAAT CAAGGAAATG
GCAGGCCATC CTAGGGTGGT GGCCATTGGG GAGATCGGAC TGGATTATTA TTATGACTTA
TCCCCCAGGG AGACCCAACA AAGGGTATTC CGAGAACAAC TACGCTTGGC CAAGGAATTA
AATAAACCCT ATATCATTCA TAATCGTGAT GCCCATGCTG ATATTATGCA GATCCTACGG
GAAGAAGCAC CCTACCCGGC AGGGGGAGTG ATGCACTGCT TTTCGGCAAG TTGGGAGATT
GCGCAGGAAT GTATCAAACT GGGTTTGTAT GTATCACTGG CAGGTCCCGT AACTTTTTCC
AATGCCGGAA AACTAAAGGA TATCGCCAGG CAGGTTCCGG TGGATTATTT ATTGGTGGAG
ACCGATTGCC CCTATCTAAC ACCGGTACCC CATCGGGGTA AGCGGAATGA GCCAGTCTAT
GTTCAACATG TGGTGGATCA TGTGGCCAAA TTAAGAAATA TGGCTGCCGA GGAACTGTCC
CAAATAACGG CGGAGAATAC TTGTCGGCTT TTTAATTTAC CCATAGTGAA ATAA
 
Protein sequence
MLIDSHAHLD NERFLEDQAE VIARCKEKLT AVINVGYDLA SSRRSLELAE TYPFIYAAVG 
VHPHDAKEAS GNYLHQIKEM AGHPRVVAIG EIGLDYYYDL SPRETQQRVF REQLRLAKEL
NKPYIIHNRD AHADIMQILR EEAPYPAGGV MHCFSASWEI AQECIKLGLY VSLAGPVTFS
NAGKLKDIAR QVPVDYLLVE TDCPYLTPVP HRGKRNEPVY VQHVVDHVAK LRNMAAEELS
QITAENTCRL FNLPIVK