Gene Dred_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0065 
Symbol 
ID4955874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp71984 
End bp73540 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content45% 
IMG OID640179219 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001111440 
Protein GI134297944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000885531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTGA AAAAACCAAA TTTTTATATT ACAACCCCCA TTTATTATCC CAGCGATAAC 
CTGCATATCG GTCATGCCTA CACCACTGTG GCAGCGGATA CTATGGCTCG CTACAAACGG
TTAACCGGCT ATGATGTCTG GTTTCTGACT GGTTCCGATG AACATGGCCA AAAAATTGAA
CGTGCTGCAA AAAATAAAAA CCAAACACCT AAAGAATATG TGGACCATAT TGTGTCAGGT
TTTAAAAAAC TGTGGGAAAG GTTAGATGTA AGTTATAATG ACTTTATTCG GACCACCGAT
GAGCGTCATC ATAAGGTGGT ACAAAAGTTT TTCCAACAGC TTTTCGATCA AGGAGACATC
TATAAATCGG AATATGAGGG CTGGTACTGT ACGCCCTGTG AAACCTTCTT TACCGAATAT
CAACTAGCAG AGGGTAAATG TCCTGACTGT CAGCGGGAGG TAGAAAAGGT CCGGGAAGAA
AGCTATTTCT TTCGTCAGTC CAAATATGCT GAGCGCTGGT TAAAATTTAT TGAAGAGAAT
CCGGAATTTA TCCAGCCGGT TTCCCGCCGC AATGAAATGG TAAGCTTTGT AAAACAGGGA
CTGGAAGACC TATGTGTATC CAGAACCACC TTTGACTGGG GTATCCGAGT TCCCTTTGAT
CCTAAACACG TGGTCTATGT TTGGGTGGAT GCCCTAACCA ATTATATTTC TGCCTTAGGC
TATGACACAG GGGATAACAG CCTTTTTCAA AAGTTTTGGC CCGCCGATAT TCACCTGATG
GCGAAAGATA TTGTGCGCTT TCATGCCATT ATTTGGCCTA TTCTGCTGAT GGCCCTAGAT
TTACCACTAC CCAAAAAAGT TATTGCCCAT GGCTGGTTGT TGCTGGACAG TGGAAAAATG
TCAAAGTCCA AGGGCAATGT GGTGGATCCC CACGTGTTAA TTGATAAGTA TGGTGTGGAT
GCAGTTCGTT ACTTCTTATT AAGAGAGCTG CCCTTTGGCT CTGATGGGTT GTACTCCGAA
GAAGCCCTGG TAAAACGGAT TAATACTGAC TTAGCCAACG ATTATGGCAA CTTGTTATCC
CGATCGGCCA CCATGATGGA AAAATACCAA CAGGGTGTGC TGCAGACACC TGGTGCACCC
GAGGGTCCTG ATGAGGAATT AATTGACCTG GCCACCGCTA CACCTAAATT GGTGGAAGAA
TACATGGAGA AAAGTGAACT ATCCAATGCC CTGGCAGCCA TCTGGCAGAT GGTTGGCAGA
GCCAACAAGT ATTTGGAGGA AACCGCTCCC TGGACCCTGG CAAAAAATAA CGAGACTGAA
AGATTGAATA CTGTTTTGTA TAATGTAGCG GAAGTAATGC GTTTTGCTAC GATTATGATT
ACTCCCTTTA TGCCCCAGCT GCCAAAGCGA GTATGGCCAC AACTGGGCAT TGAGGATCAG
ACAGAAATCC ATACCTGGGA AAGCCTACGG TGGGGTAAAC TTCCTGTTGG TACCACCGTT
AAGCGGGGTG AAGTGCTGTT CCCCCGCATT GATCTTAAAA CCCTGGAACA GGCCTAA
 
Protein sequence
MVLKKPNFYI TTPIYYPSDN LHIGHAYTTV AADTMARYKR LTGYDVWFLT GSDEHGQKIE 
RAAKNKNQTP KEYVDHIVSG FKKLWERLDV SYNDFIRTTD ERHHKVVQKF FQQLFDQGDI
YKSEYEGWYC TPCETFFTEY QLAEGKCPDC QREVEKVREE SYFFRQSKYA ERWLKFIEEN
PEFIQPVSRR NEMVSFVKQG LEDLCVSRTT FDWGIRVPFD PKHVVYVWVD ALTNYISALG
YDTGDNSLFQ KFWPADIHLM AKDIVRFHAI IWPILLMALD LPLPKKVIAH GWLLLDSGKM
SKSKGNVVDP HVLIDKYGVD AVRYFLLREL PFGSDGLYSE EALVKRINTD LANDYGNLLS
RSATMMEKYQ QGVLQTPGAP EGPDEELIDL ATATPKLVEE YMEKSELSNA LAAIWQMVGR
ANKYLEETAP WTLAKNNETE RLNTVLYNVA EVMRFATIMI TPFMPQLPKR VWPQLGIEDQ
TEIHTWESLR WGKLPVGTTV KRGEVLFPRI DLKTLEQA