Gene Dred_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0047 
Symbol 
ID4956702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp56958 
End bp58043 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID640179201 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001111422 
Protein GI134297926 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAA AACCCATTAC CGGAGAAAAA CGGGCGTTCA TGACTGGTAA CGAGGTAGTT 
GCCTGGGCTT GTTTAGCAGC AGGTGCCGAT ATTATGTACG GCTATCCCAT TACCCCGCAG
AACGAAATTA TGCACTACTG GACCCGTCAA ATCCCCAAGT ATGGCCGTAA ATTCCTGCAA
ACCGAAGACG AGCTGTCTGC TGGTTTTACC ACAGTGGGTG GTGTTTTAGC AGGTCTGAAG
GCTTTTACCG CCACCGCCGG TCCTGGTAAC ACACTGATGC AGGAACCCAT GTCCATGGCT
GAAATGATGC GACTGCCAGT CGTAACCATT GTTCAGCAGC GTGGTGGCCC GTCCACTGCG
ACAGTTATTT ACTCCCAGCA GGAAGTTACT CTGACCACCC AAGGTGGTAA CGGTGAGGGA
ATGCGTATTG TCTATTCCCC CAGCAACCAC CAAGAACTGT TTGATTATAC CATCAAAGCT
TTCAATACCG CATGGAAATA TCGTTTCCCC ACCTTTGTGC TGGGCGATGG TTATCAAGCA
AAATTACGTG AATCTGTAAC TCTGTATGAT CCTGAAGAAA AAGGGATTGA AAGAGTACCC
TCAGAGAAAT ATGTTGGTAA ACCAGGAACT CCTGGTGTAG ATCGCGAACC CGGACATTAC
CGTAACACCT ATAACACCGA AGAAGAACTC TTTGAAGTGC TGCAACAACA TTTTGCCGAC
TTCGAAAAAA TGACTCCTGA AGTAGTAGAA TATGCTCAGG ACAATGTAGA AGATGCTGAT
CTGGTAATCG TAGCTCACGG TGTGGTTTTC CGTGGCGTAC GGGATGCCGT AAAAGAATTA
AGAGAAGCGG GCTACAAGGT AGGTTTCTTC CGTCCCATTA CCCTCCGCCC CTTCCCTGCG
GAGCAGCTCA AGGCCATTGC TAACAAAACC AAAAAACTGC TGATTGCTGA GTCCGCCCAG
GGTCAGTTGG CTAAACTGGT TAAGGATGCC ATTTACGGTG CATCTGCTGA AATTGTACCT
ATGTTCCGTC CCGGTGTAGG TATCACCACA GAACAAATTG TGGCAAAAGT TAAAGAGGTG
CTCTAA
 
Protein sequence
MSEKPITGEK RAFMTGNEVV AWACLAAGAD IMYGYPITPQ NEIMHYWTRQ IPKYGRKFLQ 
TEDELSAGFT TVGGVLAGLK AFTATAGPGN TLMQEPMSMA EMMRLPVVTI VQQRGGPSTA
TVIYSQQEVT LTTQGGNGEG MRIVYSPSNH QELFDYTIKA FNTAWKYRFP TFVLGDGYQA
KLRESVTLYD PEEKGIERVP SEKYVGKPGT PGVDREPGHY RNTYNTEEEL FEVLQQHFAD
FEKMTPEVVE YAQDNVEDAD LVIVAHGVVF RGVRDAVKEL REAGYKVGFF RPITLRPFPA
EQLKAIANKT KKLLIAESAQ GQLAKLVKDA IYGASAEIVP MFRPGVGITT EQIVAKVKEV
L