Gene Dred_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0044 
Symbol 
ID4957215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp54738 
End bp55340 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID640179198 
Productrecombination protein RecR 
Protein accessionYP_001111419 
Protein GI134297923 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0424851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTACT ACTCCGGGCC GGTGGCCAGG CTGGTAGATG AATTTGCCAA GCTGCCGGGA 
ATTGGGCCCA AGACTGCCCA AAGACTGGCC TTTCATGTTT TAAATTCACC GCCGGAGCTG
GCACAGGGGC TGGCGAAAGC CCTAGTTGAA GTGAGGCAAT CAATAAAACG CTGTTCCCTT
TGTTGTAATC TAACAGATGA AGACCCCTGT TCTATCTGTC AGGATACCAC CAGAAACAGT
AACTTGCTAT GTGTAGTGGA GGAACCAAGG GATGTCATTG CCATGGAAAA AGCCCGAGGG
TATCGGGGGT ATTATCATGT TCTGCACGGA GCAATTTCAC CAATGGAAGG GATACGTCCA
GAGGACTTAA CCATAAAGGA ACTTCTACAT CGTTTACAGA ATGGTGATAT ACAGGAGGTT
ATTTTAGCAG CCAATTCGGA TGTGGAAGGA GAAACCACAG CCCTTTACTT GGCTAGACTA
TTAAAACCTC TGGGTGTAAA AGTTACTCGC ATTGCCCATG GCATTCCTGT GGGCTCGGAC
CTTGAATATG CCGATGCCAT GACCTTGAAT AAGGCATTGG AGGGCCGTGG TGAATTTGGA
TAA
 
Protein sequence
MLYYSGPVAR LVDEFAKLPG IGPKTAQRLA FHVLNSPPEL AQGLAKALVE VRQSIKRCSL 
CCNLTDEDPC SICQDTTRNS NLLCVVEEPR DVIAMEKARG YRGYYHVLHG AISPMEGIRP
EDLTIKELLH RLQNGDIQEV ILAANSDVEG ETTALYLARL LKPLGVKVTR IAHGIPVGSD
LEYADAMTLN KALEGRGEFG