| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0042 |
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| Symbol | |
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| ID | 4957319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 52517 |
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| End bp | 54139 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640179196 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001111417 |
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| Protein GI | 134297921 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000215305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCATATA AGGCGTTATA CCGAACCTGG CGACCGCAAT ATTTTAGCGA TATTGTGGGG
CAACGGCACA TTACAAGGAC TTTACAGAAT GCTTTATTAC AAGATAAAGT GGCCCATGCT
TATCTTTTCT GTGGTCCCAG GGGAACGGGG AAAACCACAA CTGCAAAGGT ATTGGCAAAG
GCTTTAAATT GCCTCGTCCC CACCAGCGGA GAACCCTGCA ATGACTGTGA GAATTGCAGG
GCTGTCAATG AGGGTAATTC TGTGGATGTG GTGGAGATCG ACGCTGCTTC CAACCGGGGT
ATTGATGAAA TTCGTGATCT AAGGGAAAAG GTTAAATTTG CCCCTTCTAC TGGGGAAAAA
AAGGTATATA TTATTGATGA AGTTCATATG CTTACGGATC AAGCCTTTAA TGCCCTATTA
AAGACCCTGG AGGAACCACC GTCCCACGTT GTCTTTGTAC TGGCAACCAC CGAAGCCCAC
AAGGTACCGG TTACTATTCT CTCCCGATGC CAGCGATTTG ATTTTCGCCG CATTAAACCC
GACGAAATGG TAGGAAGATT GCAAGAGGTT GCTCAAGGTG CAAATATTGA AGTGGAAGAA
GAAGCACTTC AATTGATCGC CAAGGCAGCA GAAGGGGGGT TGCGGGATGC CCTGAGTATA
TTGGATCAGG GTGCAGCCTT TGCCGAGAAA ACCGTCACAA CCGAAGATAT TCATAGCATA
CTAGGTACGG TAAAGCAGGA TATTTTGGTC AAAATGACCC ATTGTTTAGC AGAAGGAAAG
GCCGGGGAGG CCTTAAAATT GGTGGCCGAA ATATCAAACC GGGGCAAGGA CCTTAGACTT
TTTGGCCGTG AAATGACTTC TTTTTTAAGA GGTCTATTGG TGGAAGGGAT TGAAGGACGT
CATACAGGTA TTGGCAATGA AACGCTTTTT AGTATATTAC AAGTACTGGT CCAAGCGGAG
CAAGAGATGA AATGGAGTTC TCAACCGGCT TTAGTCTTAG AGTTGGCCTT AGTAAAGGCT
GCACGACCGG AAATTGCAGG TACCACTGAA GCATTATCCC GAAGGGTTGC TGAATTGGAA
AAACGTCTTG AGCAGGGCGT GGTGATTACA GCCCCGCGGG AAACAGTAGC ACAGGTGGAA
GAGAGAACCC TAGGGGTGAA TAAGCAGGCC CAACCGGATC AAACAAAAAT TTCGGAGCCG
GTAGAAGCAG TTACTTCGGA ACCACTGGTT ATGGCTAAGA CTCCTATTGC CAGCGACTCT
GCAACTGCTG AAAAAATTAA AAAGAACTGG CCAGCCCTAA TGAAAGGTAT TAAAGAAGGC
AAGAAGATGC CCCTTTGGTC CCTACTAAAC AGCCACCAGC CAGATTTGGA AGTACAGGGT
CATACTCTGA TAATGTATTT TCAGGAAGAC TTTGATATGA GGACAGCCGA TAAACCAGAG
TACAGAAAAT ATATGGAGTG GCTGCTGGGT AAGCACTTTG ATGGACAGTG GGAGGTACGC
TGTGTGCATG GAAAAAAGTC CATGCCTAGA TCGGCGCCGA CACCTGAGAA CGACCCGGTC
TATACAGAGG CAGTCCGTAT TTTTGGCAAG GATATCGTAT ATCTGGAAAA TGACCCCGAC
TAG
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| Protein sequence | MAYKALYRTW RPQYFSDIVG QRHITRTLQN ALLQDKVAHA YLFCGPRGTG KTTTAKVLAK
ALNCLVPTSG EPCNDCENCR AVNEGNSVDV VEIDAASNRG IDEIRDLREK VKFAPSTGEK
KVYIIDEVHM LTDQAFNALL KTLEEPPSHV VFVLATTEAH KVPVTILSRC QRFDFRRIKP
DEMVGRLQEV AQGANIEVEE EALQLIAKAA EGGLRDALSI LDQGAAFAEK TVTTEDIHSI
LGTVKQDILV KMTHCLAEGK AGEALKLVAE ISNRGKDLRL FGREMTSFLR GLLVEGIEGR
HTGIGNETLF SILQVLVQAE QEMKWSSQPA LVLELALVKA ARPEIAGTTE ALSRRVAELE
KRLEQGVVIT APRETVAQVE ERTLGVNKQA QPDQTKISEP VEAVTSEPLV MAKTPIASDS
ATAEKIKKNW PALMKGIKEG KKMPLWSLLN SHQPDLEVQG HTLIMYFQED FDMRTADKPE
YRKYMEWLLG KHFDGQWEVR CVHGKKSMPR SAPTPENDPV YTEAVRIFGK DIVYLENDPD
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