| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0040 |
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| Symbol | |
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| ID | 4957821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 48513 |
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| End bp | 49604 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640179192 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001111415 |
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| Protein GI | 134297919 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.411333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTGCC AGGTTGTCTT AGAATTACTC TCACCCTACC TGGACGGAGT CCTTGACCCT
GTCGAACATG CCACCGTTCA AAAGCACTTG GCCAGTTGCC CTGCTTGTAG CAGGGAGTTG
GCAGAACTGA AGGCATGTAT TGACCTGTTG CAGGAACTTC CTGACATAGC TCCGCCGGCT
GATTTTCGAG CTGGCTTAAT GGAAAAAATT GATAGATTAC CTTCAAGCAC AAAATCAAAT
GATCAAAGAA ATTGGTTTGA TTGTGTGAAT GGGGTTACCC GTAAGTCATG GTATAGAACG
GTTGCCGTGG CAGCAGTTAT GGTAATGACT TTGGGTGTAA CTTCCCTGTG GCAAAATGAA
GGACATCAAT TAATTCCTGT TCCCAATGAA GCACAGGAAA TTGCTGAACA AACTAACAAC
CAACAGGCCA GACAGGAACC CTTGGGTGAT TTACAAACAA CCAAACCTAC AAGTGATACT
GTTACCAAGA GTGTTAATAA AACACCTTCT AAGGGTAAGG TTGAGGCTAC CAATACAAAA
TCCCAGGGAT TCAAGGCAGT GCCCAAGCAG GCTGAAAAGG CAACCCCTGT CACCTTGGCT
AGCCAAAATG ACAGAAGGTT TGTGCCGGAG AATTATCAGC CGCAACCCAG TATAGGAATG
ACCGCAAGGT CAGTGACCTT AAAACTGGGC GTTCAGGACC AGAGTGAAGC GTTAAAATCC
ATCGGGTCCA TCACTCAAAG TAATAACGGC TCCATTATGG TACCTTATAA TGAAAGTAAT
GGCAAGTTGG CAATTAAAGT TCCTGTCCAA ACAAGTAGAT CAGTAGAAAG TCAGTTAAAG
CAATTAGGCC AAGTTATAAC TGACATGCCC TCTGAGAGAG ATTTAAGTGG GCAGCATGAA
CAAGCAGTGA ACGCTCTGGA GCAATTGAAG GTTCAACAGT CAGACTTACA AAAACAGTTG
TCTGAACAAT CCGACCCGGG CCTAGAGCAG CAGTTGGCCA ATTTAACCAC GGTTATTAAC
CAACAAATTG GGTTAATACA GCGCTTAGAA CAACAAAGCA ATTATTCTGT TATTACCGTT
ACCATTGAGT AA
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| Protein sequence | MNCQVVLELL SPYLDGVLDP VEHATVQKHL ASCPACSREL AELKACIDLL QELPDIAPPA
DFRAGLMEKI DRLPSSTKSN DQRNWFDCVN GVTRKSWYRT VAVAAVMVMT LGVTSLWQNE
GHQLIPVPNE AQEIAEQTNN QQARQEPLGD LQTTKPTSDT VTKSVNKTPS KGKVEATNTK
SQGFKAVPKQ AEKATPVTLA SQNDRRFVPE NYQPQPSIGM TARSVTLKLG VQDQSEALKS
IGSITQSNNG SIMVPYNESN GKLAIKVPVQ TSRSVESQLK QLGQVITDMP SERDLSGQHE
QAVNALEQLK VQQSDLQKQL SEQSDPGLEQ QLANLTTVIN QQIGLIQRLE QQSNYSVITV
TIE
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