Gene Dred_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0039 
Symbol 
ID4957437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp45889 
End bp48120 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content42% 
IMG OID640179191 
Productformate acetyltransferase 
Protein accessionYP_001111414 
Protein GI134297918 
COG category[C] Energy production and conversion 
COG ID[COG1882] Pyruvate-formate lyase 
TIGRFAM ID[TIGR01255] formate acetyltransferase 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACAAG CATGGTCTGA TTTTTTAGGA TTTAAATGGC AACAGGAGAT CAATGTACGT 
AATTTTATCC AATGCAATTA CAAACCCTAT GAAGGAAAAA GTAATTTTCT CTGTGAACAA
ACTCCAAAAA CCAAACAACT ATGGGAAAAA TGCCTAAAAC TATTCCAGGC AGAAAGAAAA
AATAATGGTG TGTTAAGTAT CAATACCAGT CGGGCCACAG GAATTAATAC CTTTGGACCA
GGTTTTATTG ACCGTGATTT GGAATTGATT TTTGGTTTGC AAACAGAAAA GCCTCTGGAA
CGTTCTGTGA ACCCCTTTGG CGGCTTGCGG ATGGCCAAGG AATCCTGTAA AGCCTATGGT
TACTCCTTAG ACAAACAGTT AGAAGATTTT TTTGTTAAAT ATAAAAAGAC GCATAACGAT
GGGGTTTTTG ATGCCTATAC TCCAGAAATG CGTCTGGCTA GAAGTCTTGG CATTATTACT
GGTCTGCCAG ATGCCTATGG ACGTGGCAGA ATCATCGGGG ATTACCGGCG GGTTCCTCTA
TACGGAGTTG ATCGCTTAAT TGAAGAAAAA GAAAAGGATC TGGCTAATAT GCCAACACAC
ACCCTTACTT CCCAAGCCAT TCAACTCCGG GAAGAAATTA GGGAGCAGAT TAAATCCCTA
GTTGATTTAA AAGAGATGGC CAGACAATAT GGTTTTGACA TCGGTTCTCC GGCGGCCAAT
GCAAAGGAAG CCTTTCAATG GCTATACTTT GCTTATCTTG GTGCCATTAA AGAACAAAAC
GGTGCCGCCA TGTCTTTGGG CCGAGTCAGT ACGTTTTTAG ATATCTACAT TGAGAGAGAC
ATTGAGGCGG GAGTTTTGCA AGAAACAGAG GCCCAGGAAT TGGTTGACCA GTTTGTTATT
AAACTTCGCT TAGCCAGACA ATTGAGAACT CCGGAATATG ATAAATTGTT CGCCGGGGAT
CCTATGTGGA TTACTGAAGC CATTGGTGGC ATGGGCTTAG ATGGCAGAAC CTTGGTTTCA
AAAAATTCCT ATCGTTTTCT ACAAACTTTA ATCAATCTGG GACCTGCGCC AGAACCTAAC
TTAACAATTC TTTGGTCAGA CCGTTTGCCG GAGAATTTTA AAAAATTCAG TGCCCAAATA
TCTATTAAAA CCAGTTCCAT TCAATATGAA AATGATGACT TAATGAGAGA GTATTACGGT
GATGATTATG GCATTGCCTG CTGTGTTTCT GCCATGAAAA TAGGCAAACA AATGCAGTTC
TTTGGGGCCA GGGCTAATTT AGCAAAACTG TTGTTATTAG CTATCAACGG TGGCCAAGAC
GAAATGACAG GTAAACAACT GGCACCGCCC ATTCCTTCCT TGGATGATGA CTATCTGGAT
TACGAGAAGG TTATGAAAAA CTTTCTACTG TTACAGGATT GGCTGTGCAA ATTGTATGTA
AATACCCTGA ACATTATTCA CTTTATGCAT GATAAATATG CCTACGAAAA AATCCAACTG
GCCTTGCATG ATAGCGACGT AGAAAGACTG ATGGCCTTTG GTATGGCAGG ATTGTCGGTG
GTTGCAGACT CCCTTAGCGC CATTAAATAT GCTAAGGTGT ACCCTATCCG AAATGAAGAA
GGAATTGCTG TGGATTTTAG GATTGAGGGG GATTTTCCTA AATACGGCAA TGATGACGAT
CGGGTGGATG ATATTGCGGT GGCACTGGTA CGTAGTTTTA ATAATAATTT GCAAAAATAC
ACAACTTACC GCAACGCCAA ACATACACTA TCCATCTTAA CCATTACCTC CAATGTTATG
TATGGTAAAA AAACCGGTAC TACGCCGGAT GGGCGGCAAA AGGGTGAGCC CTTTGCACCG
GGAGCTACTC CCATGCACGG CAGGGATGTG AACGGCGCCT TGGCAAGCCT TAATTCTGTG
GCAAAACTTC CCTACAATTC ATCTCTTGAC GGTATTAGCA ATACCTTCTC CATTGTTCCC
GCTGCCCTGG GGAAAACCCA TGAAGACAGG GAAGCTAACC TAGTCAACAT TTTAAGGGGT
TATTTTAATC AACAAGCCCA TCATTTAAAT GTCAATGTTC TGGATCGTAC CACATTGGAA
AGGGCGATGG AAGAACCGGA AAACTATCCA CAATTAACAG TCCGAGTTTC CGGCTATGCC
GTTCACTTTA CCAAGTTAAG CAGAGCTCAT CAGCTGGAAG TTATTAAAAG GACTTTTTTT
GAAAGATTTT AA
 
Protein sequence
MKQAWSDFLG FKWQQEINVR NFIQCNYKPY EGKSNFLCEQ TPKTKQLWEK CLKLFQAERK 
NNGVLSINTS RATGINTFGP GFIDRDLELI FGLQTEKPLE RSVNPFGGLR MAKESCKAYG
YSLDKQLEDF FVKYKKTHND GVFDAYTPEM RLARSLGIIT GLPDAYGRGR IIGDYRRVPL
YGVDRLIEEK EKDLANMPTH TLTSQAIQLR EEIREQIKSL VDLKEMARQY GFDIGSPAAN
AKEAFQWLYF AYLGAIKEQN GAAMSLGRVS TFLDIYIERD IEAGVLQETE AQELVDQFVI
KLRLARQLRT PEYDKLFAGD PMWITEAIGG MGLDGRTLVS KNSYRFLQTL INLGPAPEPN
LTILWSDRLP ENFKKFSAQI SIKTSSIQYE NDDLMREYYG DDYGIACCVS AMKIGKQMQF
FGARANLAKL LLLAINGGQD EMTGKQLAPP IPSLDDDYLD YEKVMKNFLL LQDWLCKLYV
NTLNIIHFMH DKYAYEKIQL ALHDSDVERL MAFGMAGLSV VADSLSAIKY AKVYPIRNEE
GIAVDFRIEG DFPKYGNDDD RVDDIAVALV RSFNNNLQKY TTYRNAKHTL SILTITSNVM
YGKKTGTTPD GRQKGEPFAP GATPMHGRDV NGALASLNSV AKLPYNSSLD GISNTFSIVP
AALGKTHEDR EANLVNILRG YFNQQAHHLN VNVLDRTTLE RAMEEPENYP QLTVRVSGYA
VHFTKLSRAH QLEVIKRTFF ERF