| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0014 |
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| Symbol | |
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| ID | 4957433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 21449 |
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| End bp | 23029 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640179162 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001111391 |
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| Protein GI | 134297895 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00744014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TAGTGATGGA TGGAGTATCG GAACAGGGTT TAGCCCCGTT ACGTCAACAT
ACAGATATTG AAGTTGTTAT CGGTGAAAAA ATGACAGAAG ATCAACTGGT GGAAGTTATT
GGTGAGTATG ATGCAATGAT TGTACGCAGT GCTACCAAAG TAACTCCCAG GGTAGTTGAA
GCCGCCAAGA AATTAAAAGT AATAGGTCGT GCCGGCGTTG GTGTTGACAA TATTGACCGT
AATGCTGCTA CCAACAAGGG AATTGTAGTG GTAAATGCTC CAGATGGTAA CACCATTGCT
GCTGCAGAAC ATACCATGGC CATGATGTTA GGTCTGGCTC GTAAGGTACC TGCAGCATGC
GGTAAACTGA AAAACGGCAT ATGGGATAAA AAGGCCTTCT TAGGCGTTGA GTTAAGAGGT
AAAACTCTTG GTGTTATTGG CCTTGGCCGT ATTGGAACAG CAGTTGCCAA AAGGGCTCAA
GCCATGGAAA TGAATATAGT GGCCTATGAC CCTTACATTT CCGAAGATCA TGCCCGTAAA
ATGGCTGTGG AAATTGTAAC CCTGCAGGAA CTTTTTAAAA GAGCAGATTT CATTACGATT
CATATGCCAA AGACCAAAGA AACTTACCAT ATGATTAATG AAGAAGCACT GGAACTCATG
AAAGATGGAG TTCGCATCAT AAACTGTGCC CGGGGCGGTA TTGTGGATGA AGAAGCTTTA
TATAAATTTA TGGAAGCCGG TAAAGTGGCT GGGGCAGCGT TGGATGTATT TGAGACTGAG
CCCTGCACTG ATAACCCATT GTTAAAACTG GATAACTTCA TAGCCACCCC TCACCTGGGT
GCTTCCACAC AGGAAGCGCA AATCAACGTA GCCGTAGATG TGGCAGAGGA AATTGTGGCC
GCACTGCGGG GAGATCTAGT GAAAAACGCA GTGAATATGC CATCTATGAG TCCCAAATTA
CTGGCTAAAA TTCGTCCCTT CTTGGATTTA GCAGAAAAAC TGGGTACCTT TCAGGCTCAA
ATGCTTGATG GTCGGATTGA AAAGGTTGAG GTTGTTTATA GTGGCGAGTT AGCAAAATAT
GATGTAAACC CCGTTACAAC CATATTGCTG AAGGGTTTAC TGGATCCAAT CCTACAGGAG
AATGTTAACT TTGTAAATGC TACTTTGGTG GCACGAAACC GCGGGATTTC GGTGGTTCAG
ACCACAAAGG AAAACGGTGA AGATTACCAT AACTTAATTA CTGTTTATAT ATATACTGAT
AAAGGAAGAA GAATGTTGTC CGGAACATTA TTCCAGGGCA ACGATCCGAG AATTGTAAAC
ATTGATGGAT TCCGTATTAA CGCTGCCACC CAAGGGCATA TGCTGGTGGT TCCTCATATT
GATAAGCCTG GTATTGTTGG TAAAGTTGGC ACGGTTGTAG GTGACATGGC CATCAATATC
GCAGGCATGC AGGTAGGTCG CATTGAACTG GGCGGTAAGG CCATAATGGT GATGATGGTG
GACAACACAC TTCCAACCAA TGCATTGGAA CAATTGGCAA CCATTGACGG AATTTTAGAA
GTAAAAATGG TAAGTTTATA G
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| Protein sequence | MKVLVMDGVS EQGLAPLRQH TDIEVVIGEK MTEDQLVEVI GEYDAMIVRS ATKVTPRVVE
AAKKLKVIGR AGVGVDNIDR NAATNKGIVV VNAPDGNTIA AAEHTMAMML GLARKVPAAC
GKLKNGIWDK KAFLGVELRG KTLGVIGLGR IGTAVAKRAQ AMEMNIVAYD PYISEDHARK
MAVEIVTLQE LFKRADFITI HMPKTKETYH MINEEALELM KDGVRIINCA RGGIVDEEAL
YKFMEAGKVA GAALDVFETE PCTDNPLLKL DNFIATPHLG ASTQEAQINV AVDVAEEIVA
ALRGDLVKNA VNMPSMSPKL LAKIRPFLDL AEKLGTFQAQ MLDGRIEKVE VVYSGELAKY
DVNPVTTILL KGLLDPILQE NVNFVNATLV ARNRGISVVQ TTKENGEDYH NLITVYIYTD
KGRRMLSGTL FQGNDPRIVN IDGFRINAAT QGHMLVVPHI DKPGIVGKVG TVVGDMAINI
AGMQVGRIEL GGKAIMVMMV DNTLPTNALE QLATIDGILE VKMVSL
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