Gene Dred_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0013 
Symbol 
ID4957572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp20292 
End bp21449 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content44% 
IMG OID640179161 
Productaminotransferase, class V 
Protein accessionYP_001111390 
Protein GI134297894 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00141675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGG ACAAAAAGTA TCTCTTGATT CCGGGGCCTA CACAAGTTCC CCCCCGTGTG 
GTAGAAGCCA TGTCAAGACC AATCATTGGT CACAGAAGTG CAGAGTTTCA AGGTGTTGTA
GAAAGGGTTA CTGGAAAACT AAAAAAAGTC TTTCAAACTG AGAACCATGT TTTTATACTT
GGCAGCTCGG GTACCGGTGC CCTGGAAGCG GCAGTGGCAA ATTTAGTAAA CCCTGGCGAT
AAAGTATTGG CTTTGTCCTG TGGTAAATTT GGTGAACGCT TTAGGGATTT AGCAAAAATA
TACGGCGGTG AAGTTGATTT TGTAGACTTC GGCTGGGGTT ATGACATAGA CCTAAATATT
GTAAAAAAGA AGTTAGAAGA GAACCCCGAT ATAAAAGTGG TGTTGGCTAC ACAAAACGAA
ACCTCCACTG GTGTACAAAA CGACATTGAA GGCTTGGGGA AATTGGTGGC ACAATATGAG
GCAGTACTTG CAGTGGATGC CGTAAGTGGT CTGGCTGCCA TTGATCTTAA AACCGATGAG
TGGCATGTAG ATGTTGTGGT CAGTGGTTCT CAAAAGGCCT TTATGCTGCC GCCCGGCTTA
GCATTTGTAA GTGTAAGTGA TAAGGCCTGG AAAAAAATTG AACAAAATAC CTCTCCTAAA
TACTACTTTG ATTTATTAAA GGCTAAAAAA TCCATTGCAA AATGGAACAC CGCCTATACA
ACTCCAGTAA CCATGGTATA TGGTTTGGAA GCAGCCCTGG ACATGATTCT AGAAGAAGGT
CTAGACAATG TCTTTGCACG TCATAAGCTA CTGGCTAAAG CTACACGGGC AGCTATCCAG
GGTCTTGGAT TGGAACTGCT GGCTCCAGAA GATTGTGCAT CCATGGCTGT TACAGCGGTT
CAAGCTCCAA TGGTGGTAGA TGCTGACACC CTTCGTAAGG TACTTTTAAG GGATTACGGA
GTGACCTTTG CAGGTGGTCA GGATATGATG AAGGGCAAGA TTTTCCGCAT TGCACACATG
GGCTTTGCTG ATAAAATGGA TGTTATCATT GCTATTTCTG CCCTTGAAAT GGCTCTTGGT
AAATGTGGTT ATAAGGCTGA ACTGGGTGCT GGTGTAAGAG AAGCTCAAAT GGTATTTGTA
GGAGGGGATC ACGCATAA
 
Protein sequence
MMKDKKYLLI PGPTQVPPRV VEAMSRPIIG HRSAEFQGVV ERVTGKLKKV FQTENHVFIL 
GSSGTGALEA AVANLVNPGD KVLALSCGKF GERFRDLAKI YGGEVDFVDF GWGYDIDLNI
VKKKLEENPD IKVVLATQNE TSTGVQNDIE GLGKLVAQYE AVLAVDAVSG LAAIDLKTDE
WHVDVVVSGS QKAFMLPPGL AFVSVSDKAW KKIEQNTSPK YYFDLLKAKK SIAKWNTAYT
TPVTMVYGLE AALDMILEEG LDNVFARHKL LAKATRAAIQ GLGLELLAPE DCASMAVTAV
QAPMVVDADT LRKVLLRDYG VTFAGGQDMM KGKIFRIAHM GFADKMDVII AISALEMALG
KCGYKAELGA GVREAQMVFV GGDHA