Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0006 |
Symbol | |
ID | 4956641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 4808 |
End bp | 6724 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640179149 |
Product | DNA gyrase, B subunit |
Protein accession | YP_001111383 |
Protein GI | 134297887 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.014329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAAC AGCAGCAGAA TAATAAATAC AGTGCTGACC AAATACAAGT ACTGGAAGGA TTAGAGGCAG TAAGACGCCG TCCGGGTATG TACATTGGTA GTACCAGTGC TCGGGGCCTG CATCATTTGG TATACGAAGT TGTAGACAAT AGTATTGATG AGGCCCTAGC CGGCTATTGT GATAAGATTA TTGTAACTAT TCAAGAGGAC AATTCCATTA CTGTTGAGGA CAATGGACGG GGGATACCTG TGGATCTGCA CCCCAAAGTA GGTCGACCTG CTGTAGAGGT AGTTTTAACG ATGCTGCACG CAGGCGGTAA ATTTGGGGGT GGTGGATACA AGGTTTCTGG CGGTTTGCAC GGTGTAGGGG TATCTGTGGT AAATGCTTTA TCAAAATACT TGTCCGTAGA AATTAAAAGA AATGGCAAGA TATACAAACA GGAGTATTCC CGTGGTATTC CAACCACAGA ACTACAAATC GTAGGAAACA GCAAAACAAC CGGCACCAAA GTAACCTTTA AACCCGATGA GGAAATATTT GAGGAACTGG TTTTTAGTCT TGAAACTTTA TCTCAGAGAA TCAGAGAACT GGCGTATTTA AATAAAGGGA TTAAAATTAT ACTTCAGGAT AAAAGAAAAG ACCCGGTTGC TGAACAAATT TTTCAATATG ACGGTGGAAT TAAAGATTTT GTTAAGCACC TGAACAGAAA TAAGCAGACG ATACACACAA AACCTATTTA TGTATCCGGA GAAAAAGAAC AAATAGTTGT TGAAGTTGCT ATTCAATACA ATGACGGTTA TACCGAAAAT ATGTTATCTT ATGCTAACAA TATTCACACA GTTGACGGCG GGACCCATGA AGTAGGATTA AAAACTGCCC TTACCCGGGT GATTAATGAC TATGGTAGAC AGCATGGCGT TTTAAAAAAT AACGATGCAA ACCTGTCTGG GGAAGATATC CGGGAAGGTG CTACCATTGT CATAAGTGTA AAAGTACCAG AGCCTCAATT TGAGGGTCAA ACAAAGACAA AACTGGGCAA CAGTGAAGTA AGGGGAATTG TAGATTCTAT CTTTGCTGAA AAGTTATCTA CCTATCTGGT AGAAAATCCT TCTGTGGCTA AAAAAATTAT TGAAAAAGGA ATCACAGCGG CCAGGGCCAG GGAAGCAGCC CGTAAAGCAC GGGAACTTAC TCGCAGGAAA AGTGCTTTAG AAACCATGTC TTTACCAGGT AAACTGGCAG ATTGCTCAGA AAAAGATCCA AGCGTATCGG AGATTTACTT GGTAGAGGGT GATTCGGCGG GTGGTTCTGC TAAACAAGGT CGGGAAAGAC GCTTTCAGGC TATCTTGCCC TTAAAGGGTA AAATTCTCAA TGTAGAAAAG GCTCGTATGG ATAAGATCTT GGCCAATGAA GAAATTAGAG CCATGATCAC CGCCATGGGT ACGGGTATTG GCGAAGATTT TGACATTGCT AAGGCTCGCT ATCACAAAAT TGTTATTATG ACAGATGCTG ATGTGGATGG TGCCCACATT CGAACCTTGT TAATGACCTT TTTCTACCGC TATATGAGAC AACTTATTGA AGCTGGTTAT GTTTTTGTTG CACAACCCCC TTTATATCGA GTTCGTAAAG GAAAACATGA CAGCTATTGT TATAGTGACA ATGAATTAGA AGAATTATTA AATAGAATTG GTCATGATAG AGTTAATATT CAACGGTACA AAGGTTTAGG TGAGATGAAC CCGGAACAAC TATGGGAAAC CACGATGGAT CCAGACACTA GGACTATGTT ACAGGTTACA TTAGAAGATG CCATTGAAGC TGATGCTACC TTCTCGATGC TTATGGGGGA CCGTGTGGAA CCAAGAAGAG ATTTTATTCA GGAAAATGCT AAATACGTTA GAAATTTGGA TATATAA
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Protein sequence | MDQQQQNNKY SADQIQVLEG LEAVRRRPGM YIGSTSARGL HHLVYEVVDN SIDEALAGYC DKIIVTIQED NSITVEDNGR GIPVDLHPKV GRPAVEVVLT MLHAGGKFGG GGYKVSGGLH GVGVSVVNAL SKYLSVEIKR NGKIYKQEYS RGIPTTELQI VGNSKTTGTK VTFKPDEEIF EELVFSLETL SQRIRELAYL NKGIKIILQD KRKDPVAEQI FQYDGGIKDF VKHLNRNKQT IHTKPIYVSG EKEQIVVEVA IQYNDGYTEN MLSYANNIHT VDGGTHEVGL KTALTRVIND YGRQHGVLKN NDANLSGEDI REGATIVISV KVPEPQFEGQ TKTKLGNSEV RGIVDSIFAE KLSTYLVENP SVAKKIIEKG ITAARAREAA RKARELTRRK SALETMSLPG KLADCSEKDP SVSEIYLVEG DSAGGSAKQG RERRFQAILP LKGKILNVEK ARMDKILANE EIRAMITAMG TGIGEDFDIA KARYHKIVIM TDADVDGAHI RTLLMTFFYR YMRQLIEAGY VFVAQPPLYR VRKGKHDSYC YSDNELEELL NRIGHDRVNI QRYKGLGEMN PEQLWETTMD PDTRTMLQVT LEDAIEADAT FSMLMGDRVE PRRDFIQENA KYVRNLDI
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