| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0173 |
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| Symbol | |
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| ID | 4929396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 151462 |
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| End bp | 155607 |
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| Gene Length | 4146 bp |
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| Protein Length | 1381 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642572470 |
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| Product | Rhs family protein |
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| Protein accession | YP_001102045 |
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| Protein GI | 134047119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG AAGTAGACAA AATGCGCTTC AACACCATCA TAGACGCGCA TTCCTTCATG
AAGAATTATC GCTCTGGTGA GGAGCAAGGG AAGGGAACGC CAGTTGGGGA TGCGCTTTAT
CCGGTTGCCA GTTATGGTGA TGGCCGTTAT GTCTCCAGGA TCTGTTTTAA GTATCTAGGT
GCTACTGGCG ATTATGACCC CACTACCTGC ACTGGCGACC CAGCTACGGT CTACTGGCGC
TCAACCTATG TTCTGCCGGG TGAGATGGAT AAAACACCGT TCCTGGACAG GGATCTCGGC
TTACCAACAA CGACCATGTG TGTAGGGAAC CCTATCCATC TTGGCACCGG CAACAAGTTC
CAGGCTGAAC TGGATTATCA AAGCGGAGGC TCCGACCCTT TCACATTCAC CAGATACTAC
AATAGCCACC TTCCTGATGA AGAGCTCGGC GGCTGGCGGC ATACCTACTC GCGGAGCGTC
GAGGTCAACG CCTCGAAGTA CGGTGAGAAC ATGGTTGTCC TGCACCGGCC AGAAGGGCAA
CAACTCGCGT TCTACAACTC GTCCTCTGTC TGGGTGCCAA CATGGAAAAC CGATGATACC
TTGACGAAGG ATGCTACCGG CTGGCGCTAC ACTCAATCTG ACGGGGTAGT CGAGGCCTAT
GATGAAACCG GACGACTGAC CGGCATCGAG AAGCCCAACG GCAATCACAT CACCCTGAGC
TATCTGAACG GAGAGCTATC CTCGATCACT GACGGCTTTG GCCGCACCAT CCAGTTCCAG
TATCAAGATG GCCGCATGGT CAGTGTCACC GATCCTGCTG GTGGCAGTAT TCAGTACCAG
TACAACAGCG CTGGCAAGCT GGCGGAAGTG ATCTACCAGG ACAATACGAG CCGCAGCTAT
CTCTACGATG ACCCGAATGC ACCGGGTTTG CTCTCTGGGC TGGTGGACGA GAACGGCAAC
CGTTTCGCCA CATGGGGATA TGATACTCAG GGGAGAGCGG TTCTAAGCGA ACACGCCGGG
GGCGCAGAGA AAACTCAGGT AAGCTACAAC GCTGACGGAA GCGTCTCTGT CACCAATGCC
CTCGGCCACG TTCAGCGATA CACCTACAGT CGCCACAATG GGATGCTCAA GCCTGATGTG
GTTGAGGGTG CGCCGTGTAC CGGCTTTGTG GGCGGCAAGG AAACCTACGT CTACGACAGC
AAAGGCCTCG TCTCCAGCAT TACTGACCGC GCTGGGCAGA AGCGCACGTT CACCCATAAC
GACCGGGGAT TGGAAACCAC CCAGATAGAC CAGGACGGGG GTAAGGTTAC GACCGACTGG
CTTCCTTCCA AGTCGCTCCC GGCAAAAATC ACAGAACCAA CCAGGATCAC TGAGCTCACC
TACGACACTC ATCTCCGGGT GATAAGCCGC AAGGTCACTG ATCGCAGCTC GGGCGCTTCC
CGGACATGGA CCTACACCTA TGCCCCTGTT GGTACAGGAA AGCCGAGCCT GTTGGCCTCG
GTTGATGGTC CGCGCACCGA CGTCAGCGAT GTTACGACAT TTGACTACGA TGACCAGGGC
AACCTGATCC GGACAACGAA CGCGCTGGGG CAGGTGACGC AGTTTGGTGA CTACGACGCG
AACGGTCGCG CCGGGACCAT TCAGGGTGTC AATGGTGTAA CCCAAACCCT CACCTATGAC
GCCAGAGGAA GACTTGTCAG CTCCACTGGG CCAGAAGGAA CCACGGTCTA CAACTATGAT
GCTGTGGGCC TCCTGAGTTC GCTGACCAAG CCAAATGGTG CAACCGTCAG CTATGAGTAC
GACGCTGCAC ATCGGCTGGT GGCGGAAACA GATGCACAGG GCAACCGGCG CGAGCTTGAG
CTCAATGACC TCGGGAACCC AGTAGAAGAG CGACTGCTCG ATGCGCTGGG CCAGACCCGT
TGGATAGAGC GCCGGATCTT CAACGAAATC GGCTGGCTCT CCAGTGTCTC CGACGCCTAT
AGCAATCAGT CATCGTTTTC CTACGATGTG GTGGCAAACC TGATACAGGA GACCAGTCCC
TCTGGTAACA CACACTCCTA CAAGTACGAC GGCTTCCATC ACCGGACACA AACGACCGAT
CCCCTCGGGA AGGTCACGCA GGTGCTCTAC AAGGATACCG GCGATGTTTA CCGTGTCTCC
GACCCTCGTT CGCGCCTGAC CTACTACAGC TACAACGGCT TTGGCGAAGT GACCCAGGTC
CGGAGCCCGG ACACCGGCAC CACCGACATT ACCTATGACG AAGCCGGTAA CGTGGCAACG
CGCAAAACGG CCAAGGGGCA AACCACAAGC TACAGCTATG ACGCGCTGAA CCGGATCATC
GAAACCTCCA GCGATGTCGC TGGCGAATCG CCAATTCTGT ACGGGTACGA CGAAGCAACC
TCACCATACG GCATAGGCCG CTTGACCTCA GTCGATGATG GCAACGGTGT CCGGAGATTT
GGCTACACCC CCGAAGGATG GCTGGCTTAC GAAACCTGGG AAACCCACGG GCAGAGCCTG
ACTACCCAGT ACCAATACGA TGGTGCAGGC CTCGTCACGA AGATCACGTA TCCCAGTGGC
CGTGAGGTCT CCTACACCCG TGACTCAGCC GGTGACGTCA TCGAGGTGAC AACGACACAA
GCAGGCACCA CAACAAACCT GGCAAGCCAG ATTGAGCGAG CGCCCTTTGG CCCCGTCACC
AGTATGGTCA GAGGGAACGG CATTTCAGAA AGCCGCACTC TGGATCTCGA TTACCGTGTC
ACCGGCATCG ACGCTGCTAG GGTGCATTCG CTGGTCTATC GGTACACGCC AGACTCGTTG
ATTTCAGCCA TAGACGACAA TCTCAGCTCA TCAGTCAATC AGTCACTCGG TTATGACGCG
GTTGGCCGCA TCACCTCTGC TGAGGGGATC TATGGCGTTT TGGGCTATGG CTATGACGCC
ACCGGCAACA GGACCTCGAT CACGACCGAT GGCCTGAGCC AAAGCTACAC CATCAACTAC
ATGAACAACT GGTTGGTGAA GGCCGGGCAA ACCTCCAGAA GCTATGACGC CAATGGCAAC
CTGACGAAGC AGGGGGCGGA TACCTTCACC TATGACAGCC AGAACCGGCT GGTGGCCGCA
ACGGTCGCGG GAGTGACTGT AAGCTACACA TACAACCATC TGGATCAGCG TGTAACCAAG
ACCCTAAACG GGCATACCCG GCTGCTGGTT TACGACCTGG CAGGAAACCT CATCGAGGAG
CTGGACGCGG CCACTGGAGA CGTGCTGGCG GAGTACATCT GGCTCGATGG GACACCCTTG
GGCTTTGTTC AGTCAGGACA GACCTACCAA GTCCACGTCG ATCACCTGGG CACCCCGAAG
GCACTGACCG ACGTCAGCGG CCAAGTCGTT TGGAAGGCGA GCTACAGCCC GTTCGGTAAG
GCCAGCATCA TCATCCAGGG GCCAACCTTC AACCTGCGAT TCCCAGGACA GTATTACGAC
GCGGAGACCG GGTTCCACTA CAACTGGCGG CGTTACTACG ACCCAGCGAC CGGGCGGTAC
ATTACCAGCG ACCCTCTTGG CCTGATCGAT GGAGTAAACA CCTACGGGTA TGTGCATGGA
AACCCTATGT CCAATACCGA CCCGACGGGT GAATTTGCGT TTGTTGGTGC AGGTATTGGA
GCTGGGTTGG AGCTACTTAG CCAACTAATC GAAAATAATG GGAGTTGGAA ATGTGTTAGT
TGGTCAAAAG TTGGAATCGC CGGAGCGATT GGGGCTATAG GTGGCGGCTG GGCGTCAGGA
GTTTTCAGAC ATGCCAGCTC CGGTAAATCG TGGTTCAAAT TAAGCCAAAA ATGGAGCAAT
GTCTCACCCA GAGTAAGGAA AGTTCAAGGG GTTCCACGAG GTAATGAGCT TCACCATTGG
GCTATTCAGA GAAATGGCAA GTTTGGCAAA TATGTTCCTG ACTCAATAAA AAACCATCCT
TGGAACTTGA AGTCCATTCC AAGAGATATT CACCAAAACA TTCACGGCAA TGGACCTACC
CCATATAGCG CATTTGGTCG TTGGTGGCAC GGGACGCCTG AATGGGCAAA AGTAGCTCAA
GCCTCTCCTG TTAGTGGTGG TTTAGCTGAT TCAATAAATG ATGAGGGATG CGGTTGTGCA
AATTGA
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| Protein sequence | MSTEVDKMRF NTIIDAHSFM KNYRSGEEQG KGTPVGDALY PVASYGDGRY VSRICFKYLG
ATGDYDPTTC TGDPATVYWR STYVLPGEMD KTPFLDRDLG LPTTTMCVGN PIHLGTGNKF
QAELDYQSGG SDPFTFTRYY NSHLPDEELG GWRHTYSRSV EVNASKYGEN MVVLHRPEGQ
QLAFYNSSSV WVPTWKTDDT LTKDATGWRY TQSDGVVEAY DETGRLTGIE KPNGNHITLS
YLNGELSSIT DGFGRTIQFQ YQDGRMVSVT DPAGGSIQYQ YNSAGKLAEV IYQDNTSRSY
LYDDPNAPGL LSGLVDENGN RFATWGYDTQ GRAVLSEHAG GAEKTQVSYN ADGSVSVTNA
LGHVQRYTYS RHNGMLKPDV VEGAPCTGFV GGKETYVYDS KGLVSSITDR AGQKRTFTHN
DRGLETTQID QDGGKVTTDW LPSKSLPAKI TEPTRITELT YDTHLRVISR KVTDRSSGAS
RTWTYTYAPV GTGKPSLLAS VDGPRTDVSD VTTFDYDDQG NLIRTTNALG QVTQFGDYDA
NGRAGTIQGV NGVTQTLTYD ARGRLVSSTG PEGTTVYNYD AVGLLSSLTK PNGATVSYEY
DAAHRLVAET DAQGNRRELE LNDLGNPVEE RLLDALGQTR WIERRIFNEI GWLSSVSDAY
SNQSSFSYDV VANLIQETSP SGNTHSYKYD GFHHRTQTTD PLGKVTQVLY KDTGDVYRVS
DPRSRLTYYS YNGFGEVTQV RSPDTGTTDI TYDEAGNVAT RKTAKGQTTS YSYDALNRII
ETSSDVAGES PILYGYDEAT SPYGIGRLTS VDDGNGVRRF GYTPEGWLAY ETWETHGQSL
TTQYQYDGAG LVTKITYPSG REVSYTRDSA GDVIEVTTTQ AGTTTNLASQ IERAPFGPVT
SMVRGNGISE SRTLDLDYRV TGIDAARVHS LVYRYTPDSL ISAIDDNLSS SVNQSLGYDA
VGRITSAEGI YGVLGYGYDA TGNRTSITTD GLSQSYTINY MNNWLVKAGQ TSRSYDANGN
LTKQGADTFT YDSQNRLVAA TVAGVTVSYT YNHLDQRVTK TLNGHTRLLV YDLAGNLIEE
LDAATGDVLA EYIWLDGTPL GFVQSGQTYQ VHVDHLGTPK ALTDVSGQVV WKASYSPFGK
ASIIIQGPTF NLRFPGQYYD AETGFHYNWR RYYDPATGRY ITSDPLGLID GVNTYGYVHG
NPMSNTDPTG EFAFVGAGIG AGLELLSQLI ENNGSWKCVS WSKVGIAGAI GAIGGGWASG
VFRHASSGKS WFKLSQKWSN VSPRVRKVQG VPRGNELHHW AIQRNGKFGK YVPDSIKNHP
WNLKSIPRDI HQNIHGNGPT PYSAFGRWWH GTPEWAKVAQ ASPVSGGLAD SINDEGCGCA
N
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