Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0031 |
Symbol | |
ID | 4929389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | + |
Start bp | 17942 |
End bp | 18430 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642572335 |
Product | hypothetical protein |
Protein accession | YP_001101910 |
Protein GI | 134047230 |
COG category | [S] Function unknown |
COG ID | [COG4333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00242203 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.074145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGCAA TTATCAGCAA GTGCGGCATG TACAGATACC GTCTGGAAAG GGATGTGCAA CCCGAAGGCC TTGTGTTCGG TTATTTTGGT GTAAACGGCT CTACGGCCAC GGCCACCGAG GACGATCACA CGGTCAGAAA GTGGATAGGG TTTACCAAGG TCAACGGAGG GAGGCGATTC ATAGTCGGTA ATGCTTTTGC TTTTCGGGCG ACCGACGTTC GAGAGCTGGC TACGGCGGTT GATCCTGTCG GGCCTGAAAA TGAAATCCAC TTGGAAAGGA TTATTCGGGA TGCTGATGTC TTGGTGCCCT GCTGGGGGAG CCGAACTAAG CTGCCTAAGT CTTTGCATGT TCATTTGGAC AGGCTTTTAG AGCAGCTCGT TGCATCTGGG AAGCCGGTAT TGGCATTTGG CGTGACTGGT TCGGGGGACC CGAAGCACCC ACTAATGCTT GGATATTCGA CAAAACTTGT GCCCTGGGGA GGAAAATAA
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Protein sequence | MSAIISKCGM YRYRLERDVQ PEGLVFGYFG VNGSTATATE DDHTVRKWIG FTKVNGGRRF IVGNAFAFRA TDVRELATAV DPVGPENEIH LERIIRDADV LVPCWGSRTK LPKSLHVHLD RLLEQLVASG KPVLAFGVTG SGDPKHPLML GYSTKLVPWG GK
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