Gene SNSL254_pSN254_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0031 
Symbol 
ID4929389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp17942 
End bp18430 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content52% 
IMG OID642572335 
Producthypothetical protein 
Protein accessionYP_001101910 
Protein GI134047230 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00242203 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.074145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGCAA TTATCAGCAA GTGCGGCATG TACAGATACC GTCTGGAAAG GGATGTGCAA 
CCCGAAGGCC TTGTGTTCGG TTATTTTGGT GTAAACGGCT CTACGGCCAC GGCCACCGAG
GACGATCACA CGGTCAGAAA GTGGATAGGG TTTACCAAGG TCAACGGAGG GAGGCGATTC
ATAGTCGGTA ATGCTTTTGC TTTTCGGGCG ACCGACGTTC GAGAGCTGGC TACGGCGGTT
GATCCTGTCG GGCCTGAAAA TGAAATCCAC TTGGAAAGGA TTATTCGGGA TGCTGATGTC
TTGGTGCCCT GCTGGGGGAG CCGAACTAAG CTGCCTAAGT CTTTGCATGT TCATTTGGAC
AGGCTTTTAG AGCAGCTCGT TGCATCTGGG AAGCCGGTAT TGGCATTTGG CGTGACTGGT
TCGGGGGACC CGAAGCACCC ACTAATGCTT GGATATTCGA CAAAACTTGT GCCCTGGGGA
GGAAAATAA
 
Protein sequence
MSAIISKCGM YRYRLERDVQ PEGLVFGYFG VNGSTATATE DDHTVRKWIG FTKVNGGRRF 
IVGNAFAFRA TDVRELATAV DPVGPENEIH LERIIRDADV LVPCWGSRTK LPKSLHVHLD
RLLEQLVASG KPVLAFGVTG SGDPKHPLML GYSTKLVPWG GK