| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0013 |
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| Symbol | |
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| ID | 4929517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 8485 |
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| End bp | 9462 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642572317 |
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| Product | signal peptide peptidase SppA domain-containing protein |
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| Protein accession | YP_001101892 |
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| Protein GI | 134047167 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.81268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0000208532 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAGG AAAAACTAAT GGCAGAAAAC AAAGAGATCC CCTGGGAGAA AGAACTCATT
GAGAAGTACA TGTTCACCCT GCATAAAGAG CAGGTGAAAG ACCGGCGCTG GCGGACCATG
TTGCGTGTGC TTCGCGCATC TGGTTTCGTG CTTCTCATGA TCGGCTTCAT CATTTTGGCA
TCTAATCCGG GTGGGATGCC GTGGCAAAGC GCCAAGGCAG GAGCCCCTCA CACCGCGTAT
ATCAACATCC GTGGTGAAAT TGCTGCTGGC ACTCTGGCCG ATGCTGATCA CCTTATCCCG
TCCATCCAAG CTGCATTCGA CAACCCGAAC TCACAAGCTA TCGTGCTTCG CATAAACAGC
CCTGGCGGTA GCCCGGTTCA AGCAGGACGG ATTTATGACG AAGTGAAGGC GCAGCGAGCC
CTTCATCCGG AGAAAAAGGT CTACGCCATC ATTGATGACA TCGGTGCCTC TGGCGGTTAC
TACATCGCCT CTGCTGCGGA TGAAATCTAT GCTGACCGCG CCAGCCTTGT CGGTTCTATC
GGCGTCATCA GCTCGGGGTT TGGATTCACC GGCTTGATGG ACAAGCTCGG CATCGAGCGC
CGGGCTATCA CTTCCGGAGA GCACAAAGCG CTTCTCGACC CATTCTCCCC TCTTACCTCT
GACATGAAGA AATTCTGGGA GGGCGTTCTA TCGAAAACCC ACCAGCAGTT CATCGAACGA
GTGAAGGCTG GGCGGGGTGA TCGACTGAAA GACGACCCAG AGGTGTTTTC TGGATTGCTC
TGGAACGGGG AGCAGGCCAA AGACATTGGG CTGATTGATG GCCTGGGTAG TTTGAACTCC
GTGGCGCGAG ACGTCATCCA CCAGAGCAAC TTGGTGGACT ACACACCAAC CGAAGACATC
ATCCGGCGAC TGACCCAACG AGCGAAGCTC GAAGCCAGTT CCTTCGTGCA AGAACTCAGC
GCTGTGAAAG TTTACTGA
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| Protein sequence | MQKEKLMAEN KEIPWEKELI EKYMFTLHKE QVKDRRWRTM LRVLRASGFV LLMIGFIILA
SNPGGMPWQS AKAGAPHTAY INIRGEIAAG TLADADHLIP SIQAAFDNPN SQAIVLRINS
PGGSPVQAGR IYDEVKAQRA LHPEKKVYAI IDDIGASGGY YIASAADEIY ADRASLVGSI
GVISSGFGFT GLMDKLGIER RAITSGEHKA LLDPFSPLTS DMKKFWEGVL SKTHQQFIER
VKAGRGDRLK DDPEVFSGLL WNGEQAKDIG LIDGLGSLNS VARDVIHQSN LVDYTPTEDI
IRRLTQRAKL EASSFVQELS AVKVY
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