Gene MmarC5_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1828 
Symbol 
ID4927772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1773898 
End bp1775799 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content32% 
IMG OID640167350 
Productputative DNA helicase 
Protein accessionYP_001098339 
Protein GI134046854 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID[TIGR00376] DNA helicase, putative 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTGA AGCAGATATA CGTCAATAAA TTTAAAGGGC TTGTTAGAAA AGAGCGCGAC 
CACGAAATAA ATTTTCACAA AGAAGAGATT AAAAAATTAG GAATAAAACG TGAAAATGTT
GGAAGAGCCA TTTTAAACTT AAACGGAAAA GTTCTTCGGG AATTATTTGG AGAATACGTT
GTAAGATATG GAAGACGTGA AAAATTTAAG AAAACCGATA TTTCTGTTGG AGATGTCGTT
TTAATAAGTA AAGGAAATCC CCTGCATAGC GATCTATTGG GAACTGTAAT TGAAATTGGA
TCAAACCACG TGGACGTTTC AATGGAAGTC GTTCCAAAAT GGGCTTTAAA CGACATAAGA
ATCGACCTCT ACGTAAATGA CGTTACATTT AAAAGAATGC TAAATGCACT CGATAAATTT
AACAGTACTG ATAATCGGCT TATCGATATT ATTTTGGGAT TAGATGGGCC AAAAAAATCT
AAAAAAACAG AAATTCGCTT TTTAGATTAC AGTTTAAATG AATACCAACA AGAAACTGTT
TTAGAAGCAC TTGGTGCAAG AGATTTATAT TTGATACACG GGCCTCCGGG AACTGGAAAA
ACGAGAACCA TTTCGGAAGT AATTTTACAG GAAGTTTTGA GAAAAAACAA AGTCATTGCA
ACTGCTGATT CAAACATTGC AGTTGATAAT ATTTTATCAA ACATTTCAAA GTATGAATCT
TTTAAAATCG TTAGAATCGG GCACCCTTCA AGAATTTCTA AAAAATTGAT GAAATATTCC
CTTCAAAATA AAATTACAGA ACATCCAAAC TACAGTACCT TAAAAAAGAT GAAAATGGAT
CTTCAAAAAA ATTATGATTT GAGGAAAAGT TTCAAAAGAC CTGACCCAAA ATGGAGACGG
GGTATGACTG ACGATGATAT CATTATTTTT TCAAAATTGA ATAAGGATAT AAGGGGCGTT
CCAAAAGAAA CCATCAAAAA AATGGCTGAC TGGGTAATTT GCAGTGAAAA TATCGCTAAA
TTAAAAGAAA ATATCCAAAA ATTTGAAAAA AAGATAATTG ACGATATCGT ATCAGCTAGC
GATGTTGTTG TTGCGACAAA TTCCATGGCT GGAAGTGATA TTTTAGAAGA TTACAAATTT
GATGTTTGTG CAATTGATGA AGGAAGTCAG TCGATGGAAC CTTCTTCATT AATCCCAATT
GTAATATCAA GAAAATTGAT TATTGCAGGA GATCACAAAC AGCTCCCGCC AACAGTACTC
AGTGATGAAC TAGAACTTAA AAAAACACTT TTTGAAAGAA TGATTAATGA AAATCCAGAT
TTTTCAAAGA TCCTTCAAGT ACAGTACAGG ATGAATGAAA AAATCATGGC ATTTTCAAAT
GAAATGTTTT ATGAAAATAA GCTTATTGCT CACGAATCTG TAAAATCGCA CAATTTACTT
GAGATTGTAG AAAATATTTC AAACGAAGAT AAATACATTA TAAATGAAAA ATCGCTTCAA
TTTATAAATG TTGATGGAGA AGAAAAGCAG GATTCATTTA AATCATCATA CAACGTTGAA
GAAGCCGAAA AGGTATTAGA AATTGTCTCA AAACTTCAAA AATATGAAAT TCCGGTAAGT
GTGATAACCC CTTATGATGC ACAGGTAAAA TATATCTCCA AAATGCTAAA TACGGATAAA
ATAGATGTTA AATCCGTTGA CGGGTTTCAG GGCCGAGAAA ATGAGGTTAT AGTAATTTCA
TTCGTTCGAA CTGATAAAAT GGGATTTTTA AAAGACCTTA GAAGATTAAA CGTCGCAGTT
ACTAGGGCGA GAAGAAAGTT GATAGTTGTC GGTTCCAAAA ATTTATTGAT AAAGGACGAT
GCATACTCAA AATTTTTAAA TTGTTTCAAT GATAACCGAT AA
 
Protein sequence
MTLKQIYVNK FKGLVRKERD HEINFHKEEI KKLGIKRENV GRAILNLNGK VLRELFGEYV 
VRYGRREKFK KTDISVGDVV LISKGNPLHS DLLGTVIEIG SNHVDVSMEV VPKWALNDIR
IDLYVNDVTF KRMLNALDKF NSTDNRLIDI ILGLDGPKKS KKTEIRFLDY SLNEYQQETV
LEALGARDLY LIHGPPGTGK TRTISEVILQ EVLRKNKVIA TADSNIAVDN ILSNISKYES
FKIVRIGHPS RISKKLMKYS LQNKITEHPN YSTLKKMKMD LQKNYDLRKS FKRPDPKWRR
GMTDDDIIIF SKLNKDIRGV PKETIKKMAD WVICSENIAK LKENIQKFEK KIIDDIVSAS
DVVVATNSMA GSDILEDYKF DVCAIDEGSQ SMEPSSLIPI VISRKLIIAG DHKQLPPTVL
SDELELKKTL FERMINENPD FSKILQVQYR MNEKIMAFSN EMFYENKLIA HESVKSHNLL
EIVENISNED KYIINEKSLQ FINVDGEEKQ DSFKSSYNVE EAEKVLEIVS KLQKYEIPVS
VITPYDAQVK YISKMLNTDK IDVKSVDGFQ GRENEVIVIS FVRTDKMGFL KDLRRLNVAV
TRARRKLIVV GSKNLLIKDD AYSKFLNCFN DNR