| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1825 |
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| Symbol | |
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| ID | 4927769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1771885 |
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| End bp | 1772727 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640167347 |
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| Product | spermidine synthase |
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| Protein accession | YP_001098336 |
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| Protein GI | 134046851 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG ATGCATGGTA TACAGAACCA CAAACTGAAA ATTTAAGCCT TTCAACTAAA
TTAAAAGATA TCCTTTACGT TGGACAGTCC GAATACCAAG AAATTCAGGT TCTTGACACT
TACGAATTTG GAAGGGTCTT GATCTTAGAA AACACGTACC AAACTAGTGA AAGAGATGAA
TTCATATACC ACGAATTGAT TTCACACCCT GCACTTTTTA CTCACGGAAA CCCTAAAAGA
GTTCTTGTTA TCGGCGGTGG AGATGGCGGA ACCGTTAGGG AAGTTTTGAA ACATAAAAGT
GTTGAAAAAA TAGACTTCGT TGAACTCGAT GGACAGGTTG TGGAGGTTGC TAAAAAATTC
CTTCCAACAT TAAGCTGCGA AATAGACAAC GAAAAAGTAA ACACGATCAT CACGGATGGA
ATAAAATACG TTGCAGAAAC TACTGAAAAA TACGATGTAA TCCTTGTAGA CTGCCCTGAC
CCAGTAGGCC CTGCTGCAGG ATTATTTGAA AAAGAGTTTT ACAACAACCT CTTCAAATGC
TTAAATGAAG ACGGAATCAT GGTACAGCAG ACTGAAAGCC CGCTTTTACA TGAAAAATTG
ATAAATAAAA TCAAAGGACA CTTAAAAGAT GCTGGCTTTT CAACGATCAG ACCACTCGTC
TGCAGCATTC CAACATACCC GAGCGGATTC TGGAGCTTTA CTTTGGCTTC AAAGAAAAAC
GACCCATTAA ATTCAGATAT TTCAGAAATT GAAAACAAAT TAAACGACAT GGCTACAAAA
TACTACGACC AGGACGTTCA CAAAGGAGTA TTTTTAGCTA CACCTAGATA CTTAAAAGAT
TAA
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| Protein sequence | MKFDAWYTEP QTENLSLSTK LKDILYVGQS EYQEIQVLDT YEFGRVLILE NTYQTSERDE
FIYHELISHP ALFTHGNPKR VLVIGGGDGG TVREVLKHKS VEKIDFVELD GQVVEVAKKF
LPTLSCEIDN EKVNTIITDG IKYVAETTEK YDVILVDCPD PVGPAAGLFE KEFYNNLFKC
LNEDGIMVQQ TESPLLHEKL INKIKGHLKD AGFSTIRPLV CSIPTYPSGF WSFTLASKKN
DPLNSDISEI ENKLNDMATK YYDQDVHKGV FLATPRYLKD
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