Gene MmarC5_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1732 
Symbol 
ID4928018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1682859 
End bp1684499 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content36% 
IMG OID640167248 
Producttype II secretion system protein E 
Protein accessionYP_001098243 
Protein GI134046758 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG ATTTCAAAAC TGCACAGATC AATAATCCCC ATTTGAAAAA CTATGTTGAA 
AAATTTAAAA AAACATATAT GAAAGTTCCC GAATTTGTTC CAAGCCTTTC AAGAGATTTT
AAAGAAATAA GATATCCAAA TATAATTTAT CCAATAGGAG ATCCAATATT TATCCACCTT
TACGGAACAC CAAATTTAAA AACAAGATAT ATCGCAATAG AACCTCGTTT AGCAGGATCG
GATGAAAGAA AAAAATACTT TGAAATCCTA GATAGAATTT TAGAATATGC CCCCTACAGC
GATACTCCTG AAAATGATGA AGAATTTGGG AAAATTGTTA CAAAATTATT CGATATGGTT
ACAAAGGTAT CCACACAGAA AAACGAAAAG AAAAAAGGAT TACTTTCAAA AATAACAGAT
TCTGGAAAGA TACTCGTTAC AAAAACCGAA CGGGAGAAAT TCCTCTATTT ATTGAAAAGA
GATTTAATCG GACTTGGAAC TCTTGAACCA ATCAGAAGAG ACCCATATAT TGAAGATATT
CACGTAATTG GGGCTAAAAA CTGCCAAATA GTTCATAAAA TCTACGATAT GCTTCCATCA
AATATTGAAT GGGAAGATGA AGGAGATATT TCAAATTATT TAAAAAATAT GTGTGAAAGA
ATCGGTAGAC CGGTTTCAGA TGCTACGCCA ATTGTAGATG GTTCTATGCC TGACGGATCA
AGGATAAACA TTCTTTATTC GGGAGACGTT TCATTGAAAG GTCCATCATT TACAATTCGT
AAATTTACGG ATGTTCCAAT AAGTATTACC CAAATTATCA GTTGGGGTAC AATGTCTGCA
CAGACTGCCG CATACCTTTG GCTTTGCCTC GAATACGGGA TGAGTATATT TATCTGTGGA
GAAACTGCGT CAGGAAAAAC TACATCACTA AACGCAATTT TGCCATTCGT TAAACCTAAA
TCAAAGATAT TCTCCTGTGA AGATACTTCT GAAGTAAAAC CTCCAAACCC GGTTTGGCAG
CAGTTATTAA CTAGGGAAAG AGGTCCTGAA GAGAGTAGGG TTACGCTATT CGATCTTTTG
AGAGCTGCTT TGAGATCAAG ACCAAATTAT ATCATTGTAG GGGAAATCAG GTCTGCAGAA
GGGGCTGTTG CATTCCAAGC CATGCAAACA GGTCACCCAG TAATTTCAAC GTTCCACGCT
GCAGACGTTA GAAAAATGAT TCAGAGGCTT ACCGGGGAAC CGATAAACAT TCCTCAAACA
TTTATGGATA ACTTAAACGT CTGTTTGTTC CAGCTTGCAG TTTATGCAAG AGGAAAATTC
TTAAGAAGGG TTGTTTCTGT CGAAGAAATT GAAGGATACT ACAAAGAAGT TGATGGCGTT
ATTACAAGAG GCGTATTTGA ATGGGACCCT CAAAAAGACA TTCATAATTT TACCGGATTA
AATAACAGCT ACATTCTTGA AGATAAAATT GCAACGGTTG CAGGATATGA AGATCCGAGA
GAAATTTACG ATGAACTTGA TTTAAGAGTC AGGATTCTCG AAGAAATGAT TGCAAGAGGA
ATCTTTGGTT ATTATGAAGT TTTAGACGTC ATTTGGAATT TCTATGAAAA AGGATTGGAA
GGATTGCCAT TCCAGGTTTA A
 
Protein sequence
MADDFKTAQI NNPHLKNYVE KFKKTYMKVP EFVPSLSRDF KEIRYPNIIY PIGDPIFIHL 
YGTPNLKTRY IAIEPRLAGS DERKKYFEIL DRILEYAPYS DTPENDEEFG KIVTKLFDMV
TKVSTQKNEK KKGLLSKITD SGKILVTKTE REKFLYLLKR DLIGLGTLEP IRRDPYIEDI
HVIGAKNCQI VHKIYDMLPS NIEWEDEGDI SNYLKNMCER IGRPVSDATP IVDGSMPDGS
RINILYSGDV SLKGPSFTIR KFTDVPISIT QIISWGTMSA QTAAYLWLCL EYGMSIFICG
ETASGKTTSL NAILPFVKPK SKIFSCEDTS EVKPPNPVWQ QLLTRERGPE ESRVTLFDLL
RAALRSRPNY IIVGEIRSAE GAVAFQAMQT GHPVISTFHA ADVRKMIQRL TGEPINIPQT
FMDNLNVCLF QLAVYARGKF LRRVVSVEEI EGYYKEVDGV ITRGVFEWDP QKDIHNFTGL
NNSYILEDKI ATVAGYEDPR EIYDELDLRV RILEEMIARG IFGYYEVLDV IWNFYEKGLE
GLPFQV