| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1732 |
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| Symbol | |
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| ID | 4928018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1682859 |
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| End bp | 1684499 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640167248 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001098243 |
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| Protein GI | 134046758 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG ATTTCAAAAC TGCACAGATC AATAATCCCC ATTTGAAAAA CTATGTTGAA
AAATTTAAAA AAACATATAT GAAAGTTCCC GAATTTGTTC CAAGCCTTTC AAGAGATTTT
AAAGAAATAA GATATCCAAA TATAATTTAT CCAATAGGAG ATCCAATATT TATCCACCTT
TACGGAACAC CAAATTTAAA AACAAGATAT ATCGCAATAG AACCTCGTTT AGCAGGATCG
GATGAAAGAA AAAAATACTT TGAAATCCTA GATAGAATTT TAGAATATGC CCCCTACAGC
GATACTCCTG AAAATGATGA AGAATTTGGG AAAATTGTTA CAAAATTATT CGATATGGTT
ACAAAGGTAT CCACACAGAA AAACGAAAAG AAAAAAGGAT TACTTTCAAA AATAACAGAT
TCTGGAAAGA TACTCGTTAC AAAAACCGAA CGGGAGAAAT TCCTCTATTT ATTGAAAAGA
GATTTAATCG GACTTGGAAC TCTTGAACCA ATCAGAAGAG ACCCATATAT TGAAGATATT
CACGTAATTG GGGCTAAAAA CTGCCAAATA GTTCATAAAA TCTACGATAT GCTTCCATCA
AATATTGAAT GGGAAGATGA AGGAGATATT TCAAATTATT TAAAAAATAT GTGTGAAAGA
ATCGGTAGAC CGGTTTCAGA TGCTACGCCA ATTGTAGATG GTTCTATGCC TGACGGATCA
AGGATAAACA TTCTTTATTC GGGAGACGTT TCATTGAAAG GTCCATCATT TACAATTCGT
AAATTTACGG ATGTTCCAAT AAGTATTACC CAAATTATCA GTTGGGGTAC AATGTCTGCA
CAGACTGCCG CATACCTTTG GCTTTGCCTC GAATACGGGA TGAGTATATT TATCTGTGGA
GAAACTGCGT CAGGAAAAAC TACATCACTA AACGCAATTT TGCCATTCGT TAAACCTAAA
TCAAAGATAT TCTCCTGTGA AGATACTTCT GAAGTAAAAC CTCCAAACCC GGTTTGGCAG
CAGTTATTAA CTAGGGAAAG AGGTCCTGAA GAGAGTAGGG TTACGCTATT CGATCTTTTG
AGAGCTGCTT TGAGATCAAG ACCAAATTAT ATCATTGTAG GGGAAATCAG GTCTGCAGAA
GGGGCTGTTG CATTCCAAGC CATGCAAACA GGTCACCCAG TAATTTCAAC GTTCCACGCT
GCAGACGTTA GAAAAATGAT TCAGAGGCTT ACCGGGGAAC CGATAAACAT TCCTCAAACA
TTTATGGATA ACTTAAACGT CTGTTTGTTC CAGCTTGCAG TTTATGCAAG AGGAAAATTC
TTAAGAAGGG TTGTTTCTGT CGAAGAAATT GAAGGATACT ACAAAGAAGT TGATGGCGTT
ATTACAAGAG GCGTATTTGA ATGGGACCCT CAAAAAGACA TTCATAATTT TACCGGATTA
AATAACAGCT ACATTCTTGA AGATAAAATT GCAACGGTTG CAGGATATGA AGATCCGAGA
GAAATTTACG ATGAACTTGA TTTAAGAGTC AGGATTCTCG AAGAAATGAT TGCAAGAGGA
ATCTTTGGTT ATTATGAAGT TTTAGACGTC ATTTGGAATT TCTATGAAAA AGGATTGGAA
GGATTGCCAT TCCAGGTTTA A
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| Protein sequence | MADDFKTAQI NNPHLKNYVE KFKKTYMKVP EFVPSLSRDF KEIRYPNIIY PIGDPIFIHL
YGTPNLKTRY IAIEPRLAGS DERKKYFEIL DRILEYAPYS DTPENDEEFG KIVTKLFDMV
TKVSTQKNEK KKGLLSKITD SGKILVTKTE REKFLYLLKR DLIGLGTLEP IRRDPYIEDI
HVIGAKNCQI VHKIYDMLPS NIEWEDEGDI SNYLKNMCER IGRPVSDATP IVDGSMPDGS
RINILYSGDV SLKGPSFTIR KFTDVPISIT QIISWGTMSA QTAAYLWLCL EYGMSIFICG
ETASGKTTSL NAILPFVKPK SKIFSCEDTS EVKPPNPVWQ QLLTRERGPE ESRVTLFDLL
RAALRSRPNY IIVGEIRSAE GAVAFQAMQT GHPVISTFHA ADVRKMIQRL TGEPINIPQT
FMDNLNVCLF QLAVYARGKF LRRVVSVEEI EGYYKEVDGV ITRGVFEWDP QKDIHNFTGL
NNSYILEDKI ATVAGYEDPR EIYDELDLRV RILEEMIARG IFGYYEVLDV IWNFYEKGLE
GLPFQV
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