Gene MmarC5_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1664 
Symbol 
ID4929310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp1609162 
End bp1609587 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content39% 
IMG OID640167174 
Productnickel responsive regulator 
Protein accessionYP_001098175 
Protein GI134046690 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGATA TGGATAGAAT AAGTATTTCA TTACCTACAA ATTTACTTGC AGAATTCGAC 
GAAATAATCG AAGAAAGAGG ATATGCAAGC AGAAGTGAGG CCATACGGGA CTCTATCAGA 
GATTATCTGA TAAAACATAA GTGGATTCAC AGCCTTGAAG GGGATCGGGC TGGAACGATC 
AGTATTATTT ATGATCACCA TTCCACAGAC GTAATGGAGA AATTAACAAA CATACAGCAC 
GATTATGAGA AATTAATCGT TGCAACAATC CATATGCACC TCGATCACGA CCACTGTATG 
GAGGTGGTTC TCGTTAAAGG GGATGCATCA GAAATCAAAG AATTAACCGA CAAACTTACG 
TCACAAAAGG GCGTAAAACA GGTAAAACTT ACCGTAATGG TTCCTGGCGG AAACATTCCT 
CAATAA
 
Protein sequence
MVDMDRISIS LPTNLLAEFD EIIEERGYAS RSEAIRDSIR DYLIKHKWIH SLEGDRAGTI 
SIIYDHHSTD VMEKLTNIQH DYEKLIVATI HMHLDHDHCM EVVLVKGDAS EIKELTDKLT 
SQKGVKQVKL TVMVPGGNIP Q