| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1661 |
|---|
| Symbol | |
|---|
| ID | 4929294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1607008 |
|---|
| End bp | 1607832 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640167171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001098172 |
|---|
| Protein GI | 134046687 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCAT CATCAGTTAT GTGGATATTT TTCATATTTT TATTCCTCTA TCCGCAGGTG
CTTTTTAGAT ACAGGCTTTT ACAAAGGTAT AAATTTATAA AGCAGTTCGA AGCTGTTAGA
AAAACCCGTG CAATTGTCAT GATACACAGA CAGGAGCAAT TGGCCCTCTT TGGAATTCCA
CTTTATAAAT ATATTACAAT AGAAGACAGT GAAGAGATTT TAAGGGCAAT TAGGATGACT
CCTGAAGACA TGCCAATAGA TTTAATTCTT CACACTCCCG GGGGACTCGT ACTTGCAAGT
GAACAGATTG CAACAGCCCT AAAGGAACAC AAGGCAAAAA CAACAGTTAT TATTCCGCAC
TATGCAATGA GTGGCGGAAG TTTAATTGCC CTTGCAGCAG ACGAAATAAT AATCGATAAA
AATGCAGTCA TGGGGCCAGT AGATCCACAA GTTGGCCAGT ACCCTGCAGC TTCAATTATA
AACGCGATAA ATACGAAATA CACTGATGAA TTGGATGACG AAACTTTAAT TTTGGGAGAT
ATCTCAAGAA AAGCAATATT TCAGGTTAAA GAATTCGTCT ACGAAATATT GAAAGATAAA
ATGGGCGAAG AAAAAGCAAA ATACTTATCA GAAACGCTTT CTACTGGAAA GTGGACTCAC
GACTATCCAT TAACAATTAG AAAGTTAAGG GAACTCGGAA TCGAAGTGAA CACCGATTTA
CCAGAAATAG TTTATGCATT ATTCGATCTT TACAGGCAAC CTGTGAACCA GAGGCCATCA
GTGCAGTACG TTCCAGTGCC GTACAAGAGA GGAAGTAAAA AATGA
|
|---|
| Protein sequence | MDPSSVMWIF FIFLFLYPQV LFRYRLLQRY KFIKQFEAVR KTRAIVMIHR QEQLALFGIP
LYKYITIEDS EEILRAIRMT PEDMPIDLIL HTPGGLVLAS EQIATALKEH KAKTTVIIPH
YAMSGGSLIA LAADEIIIDK NAVMGPVDPQ VGQYPAASII NAINTKYTDE LDDETLILGD
ISRKAIFQVK EFVYEILKDK MGEEKAKYLS ETLSTGKWTH DYPLTIRKLR ELGIEVNTDL
PEIVYALFDL YRQPVNQRPS VQYVPVPYKR GSKK
|
|---|
| |