Gene MmarC5_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1612 
Symbol 
ID4928691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1553860 
End bp1555086 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID640167118 
Productammonium transporter 
Protein accessionYP_001098123 
Protein GI134046638 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG CAGATTTATT TGCTGACCCA ACAAACATCG TAACAGGGCT CAGTACATTG 
GCGACTTCCG GAGATGTAAT GTTCTTAGTA TTGATGGGAA CACTCGTATT TGCAATGCAG
TTAGGATTTG CACTTCTTGA AGGGGGTCAA GTCAGGAAGA AAAATGTTAA CAACGTAATG
ATGAAAAACA TGGCAGATTG GTTAATTGGG GCAGTGTCAT GGCTCTTTAT TGGATCAGTT
CTTGCAGTGT CACTTGTTCC TGGAGACTTC TTCAGCTGGT GGGGACAGAT CTTTACAACA
AACTTTGCAG ACAATGGAAT AGACTTAGCA AACTGGTTCT TTGGGCTGGT ATTCGCAGCA
ACTGCAGCTA CAATCGTATC TGGTGGTGTT GCAGAAAGGA TTAAATTCAA ATCATACTTA
ATAATGTCTA TAATCATAAC TGCAGTGCTT TATCCACTGT TCGTATACCT TGGACCATGG
GGTTCAGGAA TGATTCCATT CAATGACTAC GCTGGAAGTT TCATAGTACA CGGTCTTGGT
GGTTTCTTGG CACTTGGAGC AATTGCAGCT CTTGGACCAA GAATCGGAAA ATTCGTTAAC
AAAAAACCAA TTTCAATTCC GGGACATAAC ATCCCAATGT CTGTATTCGG GGCATTCGTT
TTAGCAATCG GATGGTACGG ATTTAATGTA GGAAGTTCAC TTGCATTAGC AGATATTTCA
GGATTAGTAT GTGCAACAAC AACACTTGCA ATGGCAGGTG GGGGTATTGG GGCACTCCTC
GCTTCAAAAG ATGATGTATT ATTCACAGCA AACGGTCTTG TTGCAGGTTT AGTTGCAATC
TGTTCAGGAA CTGATGTTGT AAGCCCTGTA GGAGCATTAG TAATCGGCCT TATAGCGGGA
ATTCAGGTAC CAATCGTCTA CAAAATCGTT GAAAAAATGG GACTTGATGA TGTATGTGGT
GTAGTTCCTG TACACGGCAC AGCAGGTATT TTGGGAGGTA TTTTAACAGG TATCTTTGGA
ATGGCCGCTC TTGGTGGTGC TGGTGGAGTA AGTTTGGTAA ACCAGCTCAT TGCAGCAGGA
TTAACTGTAG TATATGGTAC AGGATTAGGA TTCGGTCTCG GAAAAATAGT TGGTGGATTC
ACTGGCGGAC TCAGAGTTAC TGAAGAAGAA GAAAAAATGG GACTTGACCT TGCAGAACAC
AAATTGCCAG CTTACCCTGA CGAATAA
 
Protein sequence
MATADLFADP TNIVTGLSTL ATSGDVMFLV LMGTLVFAMQ LGFALLEGGQ VRKKNVNNVM 
MKNMADWLIG AVSWLFIGSV LAVSLVPGDF FSWWGQIFTT NFADNGIDLA NWFFGLVFAA
TAATIVSGGV AERIKFKSYL IMSIIITAVL YPLFVYLGPW GSGMIPFNDY AGSFIVHGLG
GFLALGAIAA LGPRIGKFVN KKPISIPGHN IPMSVFGAFV LAIGWYGFNV GSSLALADIS
GLVCATTTLA MAGGGIGALL ASKDDVLFTA NGLVAGLVAI CSGTDVVSPV GALVIGLIAG
IQVPIVYKIV EKMGLDDVCG VVPVHGTAGI LGGILTGIFG MAALGGAGGV SLVNQLIAAG
LTVVYGTGLG FGLGKIVGGF TGGLRVTEEE EKMGLDLAEH KLPAYPDE