Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1573 |
Symbol | |
ID | 4928312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1518076 |
End bp | 1518975 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640167077 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001098084 |
Protein GI | 134046599 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000215289 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TAGGAACAGA CCTTTTGAAA AGAGGATTTG CTAAAATGGT AAAACACGGG GTTGTAATGG ATGTTACAAA CGTGGAACAG GCACAAATTG CAGAAGATGC AGGTGCTGCT GCAGTAATGG CTTTGGAAAG AGTTCCTGCA GATATTAGGG TACAAGGCGG CGTTGCAAGA ATGTCCGACC CAGAAATGAT TTTAGAAATT AAAGATGCAG TATCAATTCC AGTAATGGCA AAAGCAAGAA TTGGACACTA CGTAGAAGCG CAAGTGTTAG AATCAATCGG TGTTGACATG GTTGACGAGA GTGAAGTTTT AACTCCTGCT GACGAAGTAA ACCACATCGA TAAAAGAGCA TTTACCGCAC CATTCGTTTG TGGTGCAAGA AATTTGGGCG AAGCTTTGAG AAGAATTGAT GAAGGAGCAG CAATGATTAG GACCAAGGGG GAAGCTGGAA CTGGAAACGT TGTCGAAGCT GTAAAACACA TGAGAGCAGT TAACGAAGGA ATTGCAAGAG TTGTGGGCTA CAAAGAAATG GGTCTTGAAG CAGAATTAAT TCAAATGGCA AGAAACGAAT TAAAAGTTCC AATGGAACTC ATTTCAGAAG TTGCAGAACT TAAAAGACTC CCTGTTGTAA ACTTTGCAGC TGGGGGAATT GCAACACCTG CAGATGCAGC TTTAATGATG CAGATGGGCT GTGATGGAGT ATTTGTTGGA TCAGGAATTT TCAAATCCGG AAACCCTGAA GTAAGAGCAA AAGCAATCGT TGAAGCAACC TACAACTTCG ATAAAGCAGA CGTAATCGGA GAAGTAAGCA AAAACTTAGG GGAAGCAATG GTTGGAATAA ATATCGATGA AATTCCGGAA GAAAAGCTTC TCGCAAAAAG AGGTATCTAA
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Protein sequence | MKKLGTDLLK RGFAKMVKHG VVMDVTNVEQ AQIAEDAGAA AVMALERVPA DIRVQGGVAR MSDPEMILEI KDAVSIPVMA KARIGHYVEA QVLESIGVDM VDESEVLTPA DEVNHIDKRA FTAPFVCGAR NLGEALRRID EGAAMIRTKG EAGTGNVVEA VKHMRAVNEG IARVVGYKEM GLEAELIQMA RNELKVPMEL ISEVAELKRL PVVNFAAGGI ATPADAALMM QMGCDGVFVG SGIFKSGNPE VRAKAIVEAT YNFDKADVIG EVSKNLGEAM VGINIDEIPE EKLLAKRGI
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