Gene MmarC5_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1573 
Symbol 
ID4928312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1518076 
End bp1518975 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content41% 
IMG OID640167077 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_001098084 
Protein GI134046599 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000215289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAGGAACAGA CCTTTTGAAA AGAGGATTTG CTAAAATGGT AAAACACGGG 
GTTGTAATGG ATGTTACAAA CGTGGAACAG GCACAAATTG CAGAAGATGC AGGTGCTGCT
GCAGTAATGG CTTTGGAAAG AGTTCCTGCA GATATTAGGG TACAAGGCGG CGTTGCAAGA
ATGTCCGACC CAGAAATGAT TTTAGAAATT AAAGATGCAG TATCAATTCC AGTAATGGCA
AAAGCAAGAA TTGGACACTA CGTAGAAGCG CAAGTGTTAG AATCAATCGG TGTTGACATG
GTTGACGAGA GTGAAGTTTT AACTCCTGCT GACGAAGTAA ACCACATCGA TAAAAGAGCA
TTTACCGCAC CATTCGTTTG TGGTGCAAGA AATTTGGGCG AAGCTTTGAG AAGAATTGAT
GAAGGAGCAG CAATGATTAG GACCAAGGGG GAAGCTGGAA CTGGAAACGT TGTCGAAGCT
GTAAAACACA TGAGAGCAGT TAACGAAGGA ATTGCAAGAG TTGTGGGCTA CAAAGAAATG
GGTCTTGAAG CAGAATTAAT TCAAATGGCA AGAAACGAAT TAAAAGTTCC AATGGAACTC
ATTTCAGAAG TTGCAGAACT TAAAAGACTC CCTGTTGTAA ACTTTGCAGC TGGGGGAATT
GCAACACCTG CAGATGCAGC TTTAATGATG CAGATGGGCT GTGATGGAGT ATTTGTTGGA
TCAGGAATTT TCAAATCCGG AAACCCTGAA GTAAGAGCAA AAGCAATCGT TGAAGCAACC
TACAACTTCG ATAAAGCAGA CGTAATCGGA GAAGTAAGCA AAAACTTAGG GGAAGCAATG
GTTGGAATAA ATATCGATGA AATTCCGGAA GAAAAGCTTC TCGCAAAAAG AGGTATCTAA
 
Protein sequence
MKKLGTDLLK RGFAKMVKHG VVMDVTNVEQ AQIAEDAGAA AVMALERVPA DIRVQGGVAR 
MSDPEMILEI KDAVSIPVMA KARIGHYVEA QVLESIGVDM VDESEVLTPA DEVNHIDKRA
FTAPFVCGAR NLGEALRRID EGAAMIRTKG EAGTGNVVEA VKHMRAVNEG IARVVGYKEM
GLEAELIQMA RNELKVPMEL ISEVAELKRL PVVNFAAGGI ATPADAALMM QMGCDGVFVG
SGIFKSGNPE VRAKAIVEAT YNFDKADVIG EVSKNLGEAM VGINIDEIPE EKLLAKRGI