Gene MmarC5_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1473 
Symbol 
ID4927659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1410705 
End bp1411436 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content35% 
IMG OID640166968 
ProductABC transporter related 
Protein accessionYP_001097984 
Protein GI134046499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0234902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAGAAA TGGTTAATAT CCACAAAAAA TTCAAAGAGG CCCATGTTTT AAAAGGGGTC 
GATTTAAAAG TAGCTAAAGG AGAAGTTTTG GTAATCGTGG GCCCAAGTGG TAGTGGAAAA
TCCACACTTC TTAGATGCAT TAATGGGCTT GAAAAAATTA CTGAAGGCCA TATGTACTTT
GAGGGGGATG ACATAACCGA TAAAAAAGTC AATATTAATA AAATAAGACA AAAAATCGGT
ATGGTATTCC AACAATTTAA TTTATTTCCA CATTTAACGG TTTTGGATAA CATCACATTT
GCTCCGAGAA AGGTTTTGAA AGTTTCAAAA AAAGAAGCAG AAACTTTAGC GATGGAGTTA
TTAAAAAAAG TGGGTTTAGA AGGAAAAGAA AATCAATACC CGATACAACT TTCCGGCGGA
CAGCAGCAAA GAGTGGCAAT TGCACGTGCT CTTGCAATGA AACCTGATGC AATGTTATTT
GATGAACCGA CTTCTGCACT AGACCCTGAA CTCGTAAAAG AAGTACTTGA TGTTATGAAA
CAGCTTGCTT ACGAAGGAAT GACGATGGTT GTTGTAACTC ATGAAATGGG TTTTGCAAAA
GAAGTAGGTG ACAGGCTTAT TTTTATTGAT AATGGCCAGA TTTTAGAAGA TGGAGATCCT
GCAGAGATAT TTAGCAATCC AAAACATGAA AGGACTAAAA ATTTCTTTGG AAAAATTCTT
TCACATAATT AA
 
Protein sequence
MIEMVNIHKK FKEAHVLKGV DLKVAKGEVL VIVGPSGSGK STLLRCINGL EKITEGHMYF 
EGDDITDKKV NINKIRQKIG MVFQQFNLFP HLTVLDNITF APRKVLKVSK KEAETLAMEL
LKKVGLEGKE NQYPIQLSGG QQQRVAIARA LAMKPDAMLF DEPTSALDPE LVKEVLDVMK
QLAYEGMTMV VVTHEMGFAK EVGDRLIFID NGQILEDGDP AEIFSNPKHE RTKNFFGKIL
SHN