| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1422 |
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| Symbol | |
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| ID | 4928401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1363698 |
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| End bp | 1364477 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640166918 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001097934 |
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| Protein GI | 134046449 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.186141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAA TGGTTCCGGC ATCAGGATAC GATAGGGCAA TAACCATATT CAGCCCAGAA
GGAAGACTTT ACCAGGTTGA ATATGCTAGA GAAGCAGTGA GACGAGGAAC CACTGCAGTT
GGCATTAAGT GTAAAGATGG AGTAGTTCTC GCAGTTGATA GAAGAATTAC AAGCAAATTA
ATCGATGTTT CTTCTATTGA AAAAATATTC CAGATTGACG ACCATATTGT AGCTGCCACA
TCAGGTTTAG TTGCTGATGC AAGAGTTTTA ATCGATAGAG CAAGACTCGA AGCACAGATG
AACAGGATTT CCTACGGTGA AGCAATCACC GTTGAAGCAC TTGCAAAAAA AATCTGTGAC
ATTAAACAGG CATACACCCA ACACGGCGGC GCAAGACCAT TTGGTTTAGC ACTTTTAATT
ACCGGAATCG ACAGACATAG TGCAAGATTG TTTGAAACTG ACCCAAGCGG TGCTTTAATA
GAATACAAAG CAACAGCAAT CGGTTCAGGA AGGCCTATTG CAATGGAAGT TCTCGAATCA
AAATATAGCG AAGATATGAC TGTTAACGAA GGAATGGAAT TAGCACTTTA CGCTTTAAGC
AAAACTACTG AAGAATTAAA GCCTGAAAAC ATTGATATGG CAATTGTAAA GGATTCTGGA
AAATTAGTTG AAAAAATAAG TGTTGATGAA ATCGAAAAAA TCGTAAAAGC AGTTTACAAA
AAAGTTGAAG CTGAAGAAGC AGAAGCTGAA AAAAATAAAG GCGAAGAAGA TATTGAATAA
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| Protein sequence | MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCKDGVVL AVDRRITSKL
IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARLEAQM NRISYGEAIT VEALAKKICD
IKQAYTQHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPIAMEVLES
KYSEDMTVNE GMELALYALS KTTEELKPEN IDMAIVKDSG KLVEKISVDE IEKIVKAVYK
KVEAEEAEAE KNKGEEDIE
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