Gene MmarC5_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1313 
Symbol 
ID4929182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1259843 
End bp1260673 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content30% 
IMG OID640166806 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001097825 
Protein GI134046340 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAAAG TTCTAGTAAT CGGTCTTGGA ATGGTTGGCT ATGAAATTGT TAAGAAATAT 
TTTGAAACAG GAGAGTATAA AATTTCAATA GCTTCAAGAA GTGAAAGCGG ATTTTTCAAG
GGGGTTTTAG ATAAACGCCT AGTGGATGTT ACAAATGAAC AAAAAGTTCA GAAAGTAATA
CAGGATATAA ATCCAGATTT TGTGATAAAT ACTGCTGCAA TGACCAATGT GGATTTTTGC
GAAAAAGAAA AGGAATTAGC TTATAAGGCC AATGCAATTT CCGTAGGATA TATCGGAAAA
GCATGTAAAA GTACCGGTTC AACATTATGC CATATTTCAA CAGACTACGT TTTTGATGGT
GAGGATGGAA ATTATGTTGA AACAGATGTC ATAAATCCGA TAAACTACTA CGGATTTACA
AAAGCTGAGG GAGAACGGAT TTTAAATGAA ATGGACTATG AAAATAAGTC AATAGTTAGA
ATATCTACTC CTTATGGATT TAGTCCAGTA AAATTAAACT TTTTCACATG GGTTTTAGAA
AATTTAAAAT ATGAAAAACC AATAAATGTT ATTACAGACC AGTACAATAC CTCAACAAAT
TTGAACAATT TATCAGAGAT TATGATAAAA ATTCAGCAAA ACGATTTATC GGGTATACTC
CATTTTGGAG GATCTGAAAA ATTAAGTAGA TATGAATTTG CATTAAAAAT TTCAGAAGAT
TATAATTTAA ATAGTAAATT AATAAGTCCA GTTAAAAGTT CTGAACTTAA TTGGGTTGCA
AAACGTCCTA AAGATACTAG TTTAATTAGC AATTTAAGGG GTGTACAATG A
 
Protein sequence
MEKVLVIGLG MVGYEIVKKY FETGEYKISI ASRSESGFFK GVLDKRLVDV TNEQKVQKVI 
QDINPDFVIN TAAMTNVDFC EKEKELAYKA NAISVGYIGK ACKSTGSTLC HISTDYVFDG
EDGNYVETDV INPINYYGFT KAEGERILNE MDYENKSIVR ISTPYGFSPV KLNFFTWVLE
NLKYEKPINV ITDQYNTSTN LNNLSEIMIK IQQNDLSGIL HFGGSEKLSR YEFALKISED
YNLNSKLISP VKSSELNWVA KRPKDTSLIS NLRGVQ