Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1182 |
Symbol | |
ID | 4928808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1132316 |
End bp | 1133941 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640166673 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001097694 |
Protein GI | 134046209 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00431867 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTT TTAAAAATTT AGGTCTATCT GACGAGATAT TGGAAGCTTT AGAAAAGAAA GGCTTCACAA CCCCTACTCC TATCCAAGAA CAAGCAATTC CTATTTTAAT TGAAGGAAAA AGAGACATTG TCGGCCAAGC TCAAACGGGA ACTGGAAAAA CCGCAGCATT TGGTATCCCT ATTCTAGAAA CAATTGACGA AAGTTCAAGA AACACACAAG CACTTATTTT AGCACCTACA AGAGAACTTG CAATACAAGT TGCAGAAGAA ATCGATTCAA TCAAAGGTTC AAAAAGATTG AACGTTTTCC CAGTATATGG TGGACAGTCA ATTGACAGAC AAATAAGAGA ATTAAGAAGA GGAGTTCAGA TTGTTGTTGG AACTCCAGGA AGGATCCTCG ACCACATCTC AAGAAGAACA ATAAAACTCG AAAACGTTTC ATACGTAGTT TTGGATGAAG CTGATGAAAT GTTAAACATG GGATTCATTG ACGATGTAGA AGAAATCTTA AAATCAGTAA GCACTGAAAA AAGAATGCTT TTATTCTCAG CAACACTTCC TGACAGCATT ATGAAACTTG CTAAAAACTA CATGAGAGAA TACGATATCA TCAAAGTTAA AAGACAACAG CTTACAACAA CCTTAACTGA CCAGTCTTTC TACGAAATTC ACTCAAGAGA TAAATTTGAG TTACTTTCAA GAATTATCGA CTTAGAAAAA GAGTTCTACG GTTTAATCTT CTGTAAAACA AAAGCAGACG TTGACGAAGT TTCAAGCAGA TTAAATGAAA AAGGATACGC TGCAGAAGGT CTTCACGGAG ATATGACCCA AGCACAAAGG GAAAAAACTC TTGATAAATT TAAAGGAAGA AAAATCAACG TTCTCGTAGC AACTGATGTT GCAGCAAGAG GAATCGATAT CAACGACTTA ACACACGTTG TAAACTATGA TATTCCACAA AACCCTGAAT CATACGTTCA CAGAATTGGA AGAACAGGAA GAGCTGGAAA ACAAGGTTAC GCAGTTACAT TTGTAGAACC TTCAGAATTC AGAAAATTCA AATACATCCA GAAAATTGCA AAAACTGAAA TTAGAAAAGA AGAAGTTCCA GACGTTAAAG ACATCATTGG GGCTAAGAAA AGAAAAATTG TTTCAGGAAT AAAAGAAGTT TTAGAATCTG GAAAATACAA CGACTGCGAA AACATGGCTG CTGATTTATT AGAAGATGCA GATCCACAAG AAGTTCTTTC AGCAGTTTTA AAATACGCAT TGAAAGATGA ATTAAGCGAA TCAAACTACA AAAAGATTGG AAGAAATTCA CAAAGATCTG AAGGAAGAGA CAGAAGTGGA AGAAGCGAAG GTAGGGGAAG AAGATCATTC GTTGCTGGCG GAAACGTTAG GTTATTCGTA GCTTTAGGTA AACTCGACAA AATGAACCCT AAAAAATTAG TTGACCACAT CTCAAGAAAA TCCGATGTTA AAGGGAGAGA CATCGACGAT GTAAAAGTAT TTGAGAAGTT TTCATTTGTA ACCGTATCCT CAGACGATGC AGAAAGAATT CTCGATTCAT TCAAGCATGA AAAAAGAGGA AGAAGAGCAA TAGTTGAAGT TGCGAGCGGC AACTAA
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Protein sequence | MESFKNLGLS DEILEALEKK GFTTPTPIQE QAIPILIEGK RDIVGQAQTG TGKTAAFGIP ILETIDESSR NTQALILAPT RELAIQVAEE IDSIKGSKRL NVFPVYGGQS IDRQIRELRR GVQIVVGTPG RILDHISRRT IKLENVSYVV LDEADEMLNM GFIDDVEEIL KSVSTEKRML LFSATLPDSI MKLAKNYMRE YDIIKVKRQQ LTTTLTDQSF YEIHSRDKFE LLSRIIDLEK EFYGLIFCKT KADVDEVSSR LNEKGYAAEG LHGDMTQAQR EKTLDKFKGR KINVLVATDV AARGIDINDL THVVNYDIPQ NPESYVHRIG RTGRAGKQGY AVTFVEPSEF RKFKYIQKIA KTEIRKEEVP DVKDIIGAKK RKIVSGIKEV LESGKYNDCE NMAADLLEDA DPQEVLSAVL KYALKDELSE SNYKKIGRNS QRSEGRDRSG RSEGRGRRSF VAGGNVRLFV ALGKLDKMNP KKLVDHISRK SDVKGRDIDD VKVFEKFSFV TVSSDDAERI LDSFKHEKRG RRAIVEVASG N
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