Gene MmarC5_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1182 
Symbol 
ID4928808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1132316 
End bp1133941 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content36% 
IMG OID640166673 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001097694 
Protein GI134046209 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00431867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTT TTAAAAATTT AGGTCTATCT GACGAGATAT TGGAAGCTTT AGAAAAGAAA 
GGCTTCACAA CCCCTACTCC TATCCAAGAA CAAGCAATTC CTATTTTAAT TGAAGGAAAA
AGAGACATTG TCGGCCAAGC TCAAACGGGA ACTGGAAAAA CCGCAGCATT TGGTATCCCT
ATTCTAGAAA CAATTGACGA AAGTTCAAGA AACACACAAG CACTTATTTT AGCACCTACA
AGAGAACTTG CAATACAAGT TGCAGAAGAA ATCGATTCAA TCAAAGGTTC AAAAAGATTG
AACGTTTTCC CAGTATATGG TGGACAGTCA ATTGACAGAC AAATAAGAGA ATTAAGAAGA
GGAGTTCAGA TTGTTGTTGG AACTCCAGGA AGGATCCTCG ACCACATCTC AAGAAGAACA
ATAAAACTCG AAAACGTTTC ATACGTAGTT TTGGATGAAG CTGATGAAAT GTTAAACATG
GGATTCATTG ACGATGTAGA AGAAATCTTA AAATCAGTAA GCACTGAAAA AAGAATGCTT
TTATTCTCAG CAACACTTCC TGACAGCATT ATGAAACTTG CTAAAAACTA CATGAGAGAA
TACGATATCA TCAAAGTTAA AAGACAACAG CTTACAACAA CCTTAACTGA CCAGTCTTTC
TACGAAATTC ACTCAAGAGA TAAATTTGAG TTACTTTCAA GAATTATCGA CTTAGAAAAA
GAGTTCTACG GTTTAATCTT CTGTAAAACA AAAGCAGACG TTGACGAAGT TTCAAGCAGA
TTAAATGAAA AAGGATACGC TGCAGAAGGT CTTCACGGAG ATATGACCCA AGCACAAAGG
GAAAAAACTC TTGATAAATT TAAAGGAAGA AAAATCAACG TTCTCGTAGC AACTGATGTT
GCAGCAAGAG GAATCGATAT CAACGACTTA ACACACGTTG TAAACTATGA TATTCCACAA
AACCCTGAAT CATACGTTCA CAGAATTGGA AGAACAGGAA GAGCTGGAAA ACAAGGTTAC
GCAGTTACAT TTGTAGAACC TTCAGAATTC AGAAAATTCA AATACATCCA GAAAATTGCA
AAAACTGAAA TTAGAAAAGA AGAAGTTCCA GACGTTAAAG ACATCATTGG GGCTAAGAAA
AGAAAAATTG TTTCAGGAAT AAAAGAAGTT TTAGAATCTG GAAAATACAA CGACTGCGAA
AACATGGCTG CTGATTTATT AGAAGATGCA GATCCACAAG AAGTTCTTTC AGCAGTTTTA
AAATACGCAT TGAAAGATGA ATTAAGCGAA TCAAACTACA AAAAGATTGG AAGAAATTCA
CAAAGATCTG AAGGAAGAGA CAGAAGTGGA AGAAGCGAAG GTAGGGGAAG AAGATCATTC
GTTGCTGGCG GAAACGTTAG GTTATTCGTA GCTTTAGGTA AACTCGACAA AATGAACCCT
AAAAAATTAG TTGACCACAT CTCAAGAAAA TCCGATGTTA AAGGGAGAGA CATCGACGAT
GTAAAAGTAT TTGAGAAGTT TTCATTTGTA ACCGTATCCT CAGACGATGC AGAAAGAATT
CTCGATTCAT TCAAGCATGA AAAAAGAGGA AGAAGAGCAA TAGTTGAAGT TGCGAGCGGC
AACTAA
 
Protein sequence
MESFKNLGLS DEILEALEKK GFTTPTPIQE QAIPILIEGK RDIVGQAQTG TGKTAAFGIP 
ILETIDESSR NTQALILAPT RELAIQVAEE IDSIKGSKRL NVFPVYGGQS IDRQIRELRR
GVQIVVGTPG RILDHISRRT IKLENVSYVV LDEADEMLNM GFIDDVEEIL KSVSTEKRML
LFSATLPDSI MKLAKNYMRE YDIIKVKRQQ LTTTLTDQSF YEIHSRDKFE LLSRIIDLEK
EFYGLIFCKT KADVDEVSSR LNEKGYAAEG LHGDMTQAQR EKTLDKFKGR KINVLVATDV
AARGIDINDL THVVNYDIPQ NPESYVHRIG RTGRAGKQGY AVTFVEPSEF RKFKYIQKIA
KTEIRKEEVP DVKDIIGAKK RKIVSGIKEV LESGKYNDCE NMAADLLEDA DPQEVLSAVL
KYALKDELSE SNYKKIGRNS QRSEGRDRSG RSEGRGRRSF VAGGNVRLFV ALGKLDKMNP
KKLVDHISRK SDVKGRDIDD VKVFEKFSFV TVSSDDAERI LDSFKHEKRG RRAIVEVASG
N