Gene MmarC5_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1039 
Symbol 
ID4928718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1001621 
End bp1002199 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content37% 
IMG OID640166536 
ProductMerR family transcriptional regulator 
Protein accessionYP_001097559 
Protein GI134046073 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA AAAACCACGT CGGCATTAAA ATCAAACAAA CACGAGAAAG ACAAAATATG 
TCAATCGAAG AACTTGCAAA AGCAAGTAAC AGCAGTGTAA ATCTTATCGA AAGCTTGGAA
AATGGAGATT TAGTTCCGTC ATTAACCCCT ATTTTCAAAA TTGCAAGAGC TCTTGGCGTT
AGACTCGGTA CATTTTTAGA CGATGCTCCT CAGAGCGGTC CTGTGTTAAC CAAATCTGGA
AGCTCAGAAA GTATCGTCAG ATTTTCTGGA AAAATCGATG GAACCAAAGA TAGCAAATTA
GATTTTTATG CACTCGCAGC TGAAAAACAG GACAGACATA TGGAACCATT CCTAATAGAT
GTTCATCCAC TTGAATCTGA TGAATACAAA CTCTCTTCAC ATGAAGGAGA AGAATTTATC
TATGTAATGG ATGGAGAAAT CGAAGTATTA TATGGGCAGG AAAAATACCT CCTTAAAAAA
GGAGACAGCA TATACTACGA TTCGATAGTT CCACATGATT TGCATGCATT TGGAAAAGAT
GTTGCAAAAA TTCTTGCAGT AATATACTCA CCATTCTAA
 
Protein sequence
MAEKNHVGIK IKQTRERQNM SIEELAKASN SSVNLIESLE NGDLVPSLTP IFKIARALGV 
RLGTFLDDAP QSGPVLTKSG SSESIVRFSG KIDGTKDSKL DFYALAAEKQ DRHMEPFLID
VHPLESDEYK LSSHEGEEFI YVMDGEIEVL YGQEKYLLKK GDSIYYDSIV PHDLHAFGKD
VAKILAVIYS PF