Gene MmarC5_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1024 
Symbol 
ID4928480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp991041 
End bp991361 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content36% 
IMG OID640166522 
Productbranched-chain amino acid transport 
Protein accessionYP_001097545 
Protein GI134046059 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0636348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATGG CGATGAGTAG GGAAGAAATG GTATTATTAG TGATATTCAT GGCAATTGTA 
ACATATATTC CAAGAATGCT CCCAATCGTG CTGTTTAAGG ATTCAAAACT ACCGCATTTT
TGGAGGGCAT TTTTTAGCTA CATTCCTTAT GCGGCTCTAG CATCGTTAAT ATTCCCCGGA
ATAATTTATT CAACAGGAAA TATTTATTCA GCAGTATTTG GGGGAATTGT TTCTTTAATA
CTGGCGTACT ACCGATTAAA CGTGATAATC GTAGTATTTG GGGGAATAAT TGGCGCATAT
ATTGTCCATA CTTTGATTTA A
 
Protein sequence
MVMAMSREEM VLLVIFMAIV TYIPRMLPIV LFKDSKLPHF WRAFFSYIPY AALASLIFPG 
IIYSTGNIYS AVFGGIVSLI LAYYRLNVII VVFGGIIGAY IVHTLI