Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1024 |
Symbol | |
ID | 4928480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 991041 |
End bp | 991361 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640166522 |
Product | branched-chain amino acid transport |
Protein accession | YP_001097545 |
Protein GI | 134046059 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0636348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATGG CGATGAGTAG GGAAGAAATG GTATTATTAG TGATATTCAT GGCAATTGTA ACATATATTC CAAGAATGCT CCCAATCGTG CTGTTTAAGG ATTCAAAACT ACCGCATTTT TGGAGGGCAT TTTTTAGCTA CATTCCTTAT GCGGCTCTAG CATCGTTAAT ATTCCCCGGA ATAATTTATT CAACAGGAAA TATTTATTCA GCAGTATTTG GGGGAATTGT TTCTTTAATA CTGGCGTACT ACCGATTAAA CGTGATAATC GTAGTATTTG GGGGAATAAT TGGCGCATAT ATTGTCCATA CTTTGATTTA A
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Protein sequence | MVMAMSREEM VLLVIFMAIV TYIPRMLPIV LFKDSKLPHF WRAFFSYIPY AALASLIFPG IIYSTGNIYS AVFGGIVSLI LAYYRLNVII VVFGGIIGAY IVHTLI
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