Gene MmarC5_1004 details

Gene Information

• Locus tag: MmarC5_1004
• ID: 4928173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 971619
• End bp: 972257
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640166502
• Product: orotidine-5'-phosphate decarboxylase
• Protein accession: YP_001097525
• Protein GI: 134046039
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0284] Orotidine-5'-phosphate decarboxylase
• TIGRFAM ID: [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.540991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTAAAAT TAATGCTTGC ACTTGATGTA ATGGATGAAA AAAAGGCAGT TTTGATTGCT 
AAAGAAACTT CAGAGTACGT TGACTCTATA AAAATAGGAT ACCCGTTAGT TTTAGCTACT 
GGATTAAATA TAATCGACAA AATAAAAGAA GCTACCAGCA AAGAAGTAAT CTGTGATTTC 
AAAGTTGCGG ACATTCCTTC AACAAATGAA AAAATCGCTG AATTAACGCT AAATCACGCT 
GACGGGATAA TTTGTCAGGG TTTTGTGGGT TCAGACAGTG TTTCTGCAAT TTTAAAGGTT 
GGAAAAGCAA AAAATAAAAA AGTAATAATG GTAACAGAAA TGTCTCACCC CGGAGCTACA 
GAATACTTGC AAAACGTAGC TGAAGATATG GCAAAAATGG CTGATAAATT AAAAGTTAAT 
GGAATAGTTG CACCATCAAC ACGGCCTGAA AGATTAAAAG AAATCAAATC TATTGTAAAA 
GACGCTTTTG TAATATCCCC CGGAGTTGGA GCCCAGGGTG GAAATTTAAG CGATGTTTTA 
AATGTTTTAA GTGAAAACGA CTATGTAATT ATTGGTAGAG CAATCTACGA AAATGAAAAT 
CCAAAAGAAA TGGCAAGACA GTACAAAATG CAAATGTGA 

 

Protein sequence

MVKLMLALDV MDEKKAVLIA KETSEYVDSI KIGYPLVLAT GLNIIDKIKE ATSKEVICDF 
KVADIPSTNE KIAELTLNHA DGIICQGFVG SDSVSAILKV GKAKNKKVIM VTEMSHPGAT 
EYLQNVAEDM AKMADKLKVN GIVAPSTRPE RLKEIKSIVK DAFVISPGVG AQGGNLSDVL 
NVLSENDYVI IGRAIYENEN PKEMARQYKM QM