| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0971 |
|---|
| Symbol | |
|---|
| ID | 4928658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 942730 |
|---|
| End bp | 943923 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640166469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097492 |
|---|
| Protein GI | 134046006 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0827102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA AGGATATAGT TTCTTTTGCG GGAAGAAACA TAACTCAAAA AAAGACGCAG
AGTCTTTTAA CGATAATTGG TATTGTTATA GGTATTTTGG CAATTGTAAG TCTTATTTCT
TTAGGGTATG GTGTTCAAAA TTATATTACT GAAGAAATAT CCAAAGCAGG AGCCAGCGTT
ATTACAATAT ACCCTTCACA GCAGATTACA AGCATTGCAA TGTCCAAAAA TTTTAACGAT
AGGGATTTAA GGGCTGTAGA AAATGTAAGG GGTGTTGATG TTTTATTGTA CGGCTGGTTT
GGGGGGGCCC TTGTAACATA CAATGATCAG GAATACTACT CAAGCGTTTT TGCAACAAAA
GCATCAATAT ACCAGATATT TTTCACTGAA GCTTATGGAT ATGAGCTTGA AAAAGGTAGA
TGGATGAAAG ACAGTGATAC ATACACATGT GTGATCGGAA ACAGCCTATC ACACGATACA
TTCGATAGGG AAATAGATCT TGGGGATAAA ATTGAAATTA ACGACAAAAA ATATAAGGTA
GTGGGCGTTT TAGAACCTCT TGGAAACCCT GATGATGATA ATTCTATTGT AATTCCATAC
GAAGCAGCTT CAGAAGTTTT CGATGTAACG GATGAGTACA ATGTATTCAT GGTTAAGATA
AGGGATGGTG AAAATGTTGC CAAAGTTGCA GAAGAAATCG AAAAGGAACT CGAAGATTCA
AGGGGGGACG AAAACTTTTC AGTTTTAACT TCAGAACAGC TTGCCGAGTC AATTAATAGT
ATTTTTAGTG TTTTAACAAT ATTCTTGGTT GGTGTTGCAG GGATTTCATT ACTCGTGGGT
GCTGTTGGGA TTTCAAACAC GATGCACATG AGTATTTTGG AAAGAAGAAA AGATATTGGA
ATTTTAAAAG CACTTGGTGC CGAAAATAAC ACGATACTTT CAATATTCGT TGTCGAAGCT
GGATTTTTAG GGCTTTTCGG CGGAATTATC GGGACAATTC TTGGAATATT AATTGCAAAG
GGTATTGAAT ACATTGCAGA AATTTCAGGT TATGGATTAA TCAGGGCATG GATTTCATGG
GAATTGATTA TAGGAGTTTT AATATTTTCA TTTGTGGTCG GAATTTTAAG TGGCTACTTC
CCTGCAAGAA GCGGTGCAAA ATTAAACCCT GTTGATACTT TGAGAGGGGA ATAA
|
|---|
| Protein sequence | MKLKDIVSFA GRNITQKKTQ SLLTIIGIVI GILAIVSLIS LGYGVQNYIT EEISKAGASV
ITIYPSQQIT SIAMSKNFND RDLRAVENVR GVDVLLYGWF GGALVTYNDQ EYYSSVFATK
ASIYQIFFTE AYGYELEKGR WMKDSDTYTC VIGNSLSHDT FDREIDLGDK IEINDKKYKV
VGVLEPLGNP DDDNSIVIPY EAASEVFDVT DEYNVFMVKI RDGENVAKVA EEIEKELEDS
RGDENFSVLT SEQLAESINS IFSVLTIFLV GVAGISLLVG AVGISNTMHM SILERRKDIG
ILKALGAENN TILSIFVVEA GFLGLFGGII GTILGILIAK GIEYIAEISG YGLIRAWISW
ELIIGVLIFS FVVGILSGYF PARSGAKLNP VDTLRGE
|
|---|
| |