| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0882 |
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| Symbol | |
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| ID | 4928195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 862727 |
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| End bp | 864634 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640166382 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001097405 |
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| Protein GI | 134045919 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.28665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGCTG AAGATATATT AAACGAGATA AAGGCGGCGG TTATAAACAA AGCCCCAGGA
AATGCGGTTA TTACTGACGT CGAATTTGAA GGTTCAGAAG TAGTTATCTA TGCAAAAAAC
CCAGAACTTT TTTCAAACAA TCTTATCAAA GAATTTGCAA GAGATTTTAG AAAAAGACTT
GCAATTAGAC CGGATCCATC TGTTTTAGTC GAACCTGATA TCGCGAAAGA TAAAATTTTA
AAAATAGTTC CAGAAGATGC TGAAATTACA AACTGTATTT TCGATGCAAA CACAGGTGAA
GTAATTATCG AATCTAAAAA ACCTGGACTT GTAATTGGAA AAGAAGGCTC AACTCTTGAA
GATATTAAAA AAGCAATTCA ATGGGCCCCA AAACCAGTTA GAACCCCCCC AATTCCATCA
GATACCATTA AAGCGATTAG AGCTACAATG TATCGAGAAA GAGCGGATGT AAAAGATATT
TTAAGAAGAA TTGGAAGAAG AATCCACAGA GACGTAAGAC TTAGAGATGA TTCATGGATT
AGAACTTCAT TTTTGGGTGG AAGTAGGGAA GTTGGAAGAA CCTGTCTTTA CCACCAGACT
CCTGAAAGCA GGATTTTAGT TGATTGCGGT ATTAACATTG CTGTTGATGA TGAAAAAGCA
TTCCCACATT TTGATGCACC GGAATTTTCA ATCGAAGAAA TAGATGCAGT TGTAGTAACT
CACGCACACC TTGACCACTG TGGATTTATT CCAGGATTAT TCAGATACGG TTACGATGGG
CCAGTTTACT GTACAAAACC TACAAGAGAT TTAATGACCC TTTTACAGAA AGATTATGTA
GACATTACTG AAAAAGAAGG TAAAAATGTT CCATATTCGT CAAAAGATAT TAAAAACTGT
ATCAAACATA CAATACCTCT TGATTACGGA GTTACTACAG ACATTGCACC TGCAATCAAA
TTGACACTCC ACAATGCAGG GCACATTTTG GGTTCAGCAA TTGCACACTG CCACGTTGGT
GAAGGATTAT ATAACGTTGC ATACACAGGA GACATTAAAT TTGAAGCATC AAGATTGTTA
GAACCTGCAG TATGCCAGTT CCCACGACTT GAAACTTTGA TTATTGAATC TACTTACGGA
GGATACGATG ACGTACTTCC AGAAAGAGAT GAAACAGAAA AAGAATTCCT AAGAGTAATT
GCTGAAACCA TTGCAAGAAA AGGAAAAGTA ATAATTCCAG TATTCGGTAT CGGAAGAGCT
CAAGAATTGA TGCTTGTTTT AGAAGAAGGA TACAATCAGG GAATGTTTAA TGCTCCAGTA
TATTTAGATG GGATGATCTG GGAAGCAACT GCAATACACA CCGCATATCC AGAATATCTC
TCTAAAAATA TGAGAAATAG AATTTTCCAC GAAGGAGACA ACCCATTCCT TTCAGAAGTA
TTTAAAAAAG TTAAAAATAC AAACGATAGA AGAAACATTA TCGACAGTGA CGAACCAAGT
ATTATTTTAA CAACTTCTGG TATGCTTAGC GGTGGACCGA GTGTTGAATA CTTTAAAAAT
CTCGCAGATA ACGAGAAAAA CGCAATTGTA TTTGTAGGTT ACCAATCCGA AGGAACATTG
GGTAGAAAAA TCCAGAAAGG ATTTAAAGAA ATCCCATTGA TGGGTAAAAA CGGAAGAAGT
AAAGCGGTTA AAGTAAACCT GTCAGTCCAT ACATTGGAAG GATTTTCGGG CCACAGTGAC
AGAAAACAGC TCATAAAATA CCTTAGAAAA TTAAAACCGA TCCCTGACCG CATATTAACA
GTTCACGGGG AAGTTTCAAA ATGTATCGAC CTTGCAAGTA CTGCATACAA ATTATTTAAG
AAAGAAACAA AAGCTCCAAT GAATCTCGAT TCAATAAGAT TGAGATAA
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| Protein sequence | MSAEDILNEI KAAVINKAPG NAVITDVEFE GSEVVIYAKN PELFSNNLIK EFARDFRKRL
AIRPDPSVLV EPDIAKDKIL KIVPEDAEIT NCIFDANTGE VIIESKKPGL VIGKEGSTLE
DIKKAIQWAP KPVRTPPIPS DTIKAIRATM YRERADVKDI LRRIGRRIHR DVRLRDDSWI
RTSFLGGSRE VGRTCLYHQT PESRILVDCG INIAVDDEKA FPHFDAPEFS IEEIDAVVVT
HAHLDHCGFI PGLFRYGYDG PVYCTKPTRD LMTLLQKDYV DITEKEGKNV PYSSKDIKNC
IKHTIPLDYG VTTDIAPAIK LTLHNAGHIL GSAIAHCHVG EGLYNVAYTG DIKFEASRLL
EPAVCQFPRL ETLIIESTYG GYDDVLPERD ETEKEFLRVI AETIARKGKV IIPVFGIGRA
QELMLVLEEG YNQGMFNAPV YLDGMIWEAT AIHTAYPEYL SKNMRNRIFH EGDNPFLSEV
FKKVKNTNDR RNIIDSDEPS IILTTSGMLS GGPSVEYFKN LADNEKNAIV FVGYQSEGTL
GRKIQKGFKE IPLMGKNGRS KAVKVNLSVH TLEGFSGHSD RKQLIKYLRK LKPIPDRILT
VHGEVSKCID LASTAYKLFK KETKAPMNLD SIRLR
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