| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0877 |
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| Symbol | |
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| ID | 4927508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 855575 |
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| End bp | 856918 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640166377 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001097400 |
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| Protein GI | 134045914 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.371074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATATA AAAGTGAATT TTTAGGAACT GAAGACGTTA AAACACTATT AGTTAAACTG
TCAATTCCTG CAATAATTGG AATGCTAATA ATGGCACTTT ATAACGTAGT CGATGGATTT
TTTATCGGCA GATGGGTTGG AACAGCCGCA TTTACGGGAA TAGCGTTGAT ATTTCCATTC
CAAATGATAA TTATGGCATT TGGTGTAACT TTTGGAATTG GTGGATCATC CCTTTTATCA
AGAAAACTTG GTGAAGGAGA TTTAGACTCT GCAAGAAAAG CTGGAGGAAA TTCAATCAGC
AGCGTTTTAA TTTTATCTGT ATTGATAACA ATTATCGGAA TTATATTCAT GGTTCCAATA
TTAAACATTC TTGGAACTTC TGCCGATATA TTCCCTTACG CAAAAGATTA CTATGAAATA
ATACTCTACG GAACAGTATT TAACAGCTAT TTGGTTGCTG CAAACAACCT TGTTCGTGCA
GAAGGAATGG CTAAAGTTGC AATGTTTGCA ATGGTTGTCC CTGCAATAAT AAACATAATC
CTTGATCCAA TTTTAATCAT AGTATTTAAT ATGGGAATAA GTGGTGCAGC AATTGCAACA
GTGCTATCTC AAATCATCGG TGTAATTTAC ATATTAAAAC ACCAATTTGG AAAAAATACG
AGCATTAAAT ATGCAATGAA TGATTTCTTT ATCAATATTA AGATTTTAAA AGAAACTGTA
TTTATAGGAG CTTCTGAATT TGCGAAATTG ATTATAAGCA GTATCCTTTT GATCGTTGGA
AATAATTTGC TTGGAATATA TGGTGGAGAT ATTGCAATTG CAATTTATGG GGTGATCATG
AGAATTGCAA TGATTTTACT AATGCCTGTT CTTGGAATCG TACAGGGCTT ACAGCCAATT
GTTGGATATA ACTACGGAAA AGGACAGTTA AATAGAGTCA GTGAATCAAT AAAACTTGCT
TTAGTTGGAA CTACAGGTCT CTGTTTACTC GGATTTACAC TTGTAATGAT ATTCCCTGAA
ATGTTTATAC AGATATTCAT AACTGATCCA GAAGTAATCT CACAAGGCGT TTTTGCAACA
AGAATATTCT TCATGTTCTC GTTCCTTATC GGTGCTCAAA TGACAATAGG TGGATTATAC
CAATCACTTG GTAAAGCAAA ACCTGCATTC ATTATTTCTT GCGCAAGACA GACTTTGTTT
TTAATGCCTG CCCTGCTTAT TCTTCCACTA TTCTTTGGAT TGAACGGAAT ATGGTTTTCA
TTTCCAATAG GGGATTTGTT AGGCTTCACT CTTGCAAGCG GTATTATATA TAACGATAGA
AAATCATTAA ACCTATCTTC TTAA
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| Protein sequence | MAYKSEFLGT EDVKTLLVKL SIPAIIGMLI MALYNVVDGF FIGRWVGTAA FTGIALIFPF
QMIIMAFGVT FGIGGSSLLS RKLGEGDLDS ARKAGGNSIS SVLILSVLIT IIGIIFMVPI
LNILGTSADI FPYAKDYYEI ILYGTVFNSY LVAANNLVRA EGMAKVAMFA MVVPAIINII
LDPILIIVFN MGISGAAIAT VLSQIIGVIY ILKHQFGKNT SIKYAMNDFF INIKILKETV
FIGASEFAKL IISSILLIVG NNLLGIYGGD IAIAIYGVIM RIAMILLMPV LGIVQGLQPI
VGYNYGKGQL NRVSESIKLA LVGTTGLCLL GFTLVMIFPE MFIQIFITDP EVISQGVFAT
RIFFMFSFLI GAQMTIGGLY QSLGKAKPAF IISCARQTLF LMPALLILPL FFGLNGIWFS
FPIGDLLGFT LASGIIYNDR KSLNLSS
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