Gene MmarC5_0850 details

Gene Information

• Locus tag: MmarC5_0850
• Symbol: xseA
• ID: 4927810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 825515
• End bp: 826738
• Gene Length: 1224 bp
• Protein Length: 407 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640166349
• Product: exodeoxyribonuclease VII large subunit
• Protein accession: YP_001097373
• Protein GI: 134045887
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1570] Exonuclease VII, large subunit
• TIGRFAM ID: [TIGR00237] exodeoxyribonuclease VII, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.647284
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCAAT TAACTTTAGA AAGTGCATTT TCAAACACAT TAACTGTTTC AGAACTAAAT 
AATTATGTAA AAAGTACTTT AGAAGAAGAT TATTTATTGA AACGAGCATC CATTAAAGGA 
GAAATTTCAA ACTGTACTTT GCACAAATCT GGACATGTTT ATTTTACATT AAAAGATGAA 
AATAGCTCAA TTGACTGCGT AATGTTTAAA CCATACGCCA AAAACTTAAA TTTCAGTCCG 
ACTGAAGGAA TGGGCGTAAT CTTAAAAGGA AAAGTGTCAT TATATGCAAA AACCGGAAAA 
TACCAGTTTT ACTGTAATTC CATGGAAAAA GATGGGATTG GGGATTTGTT TATAAAATTT 
GAAAAATTAA AAGAAAAACT TGAAAATGAA GGATTATTTA GTGAAAAATA CAAACAAAAA 
ATTCCTAAAT ATCCAAAAAA CATTGGAATA ATTACTTCCC CAACCGGGGC TGCCATTAAG 
GACATTATCA AAGTTGCGAG AAATAGAAAC AGTTCTGTTA ATTTAATTAT CCATCCTGCA 
GTAGTTCAGG GTGAATCTGC TGCAAAAACA GTTATTGCTG GACTTTCAGA ACTAAATAAA 
CTTGAAAAAA TTGATTTAAT AATTATTGCT CGCGGTGGAG GTTCGATGGA GGACCTATGG 
TGCTTTAATG ATGAATCACT TGCAAGGGCA ATTTTTGAAT CAAAAAAACC AGTGGTTACA 
GGAATTGGGC ATGAAATTGA CTTTACAATT TCCGATTTTG TGAGCGATTT AAGGGCGGCA 
ACACCCTCGA ATGCCGCAGA ACTTACCGTT TACAATGAAC ATGAATTAAA ATCAATAATA 
GATAACTTTG AAAGAATACT AAAACACCGT ATAAAAATTG AAATTGCAAA CAGGTCTTAT 
GAATTAGATA TTCTTTATTC AAAAATAGAA AAAAATAGCC CTAAATCCAA AATAGAAAAG 
CAGAAATTAC ATATCGATAG AATTATGACT TTAATGAATC ATGAAATTAA AAACAGGATT 
TCTTACGAAT TAAAACGCTT TGAAAAATCA TATTCACTTT TGAATGCATA TAACCCATTA 
AATGTATTGA ATAAAGGTTA CAGCATTATA CAGGATGAAA ATGAAAAGAT TATAAGCTCT 
AAAAATTTGT TAAAGACGGA AAATGATGTA AAAATTACGT TAAAAGATGG AACTGTTGAT 
GCACATATTA CTTTGAAAGA ATGA 

 

Protein sequence

MLQLTLESAF SNTLTVSELN NYVKSTLEED YLLKRASIKG EISNCTLHKS GHVYFTLKDE 
NSSIDCVMFK PYAKNLNFSP TEGMGVILKG KVSLYAKTGK YQFYCNSMEK DGIGDLFIKF 
EKLKEKLENE GLFSEKYKQK IPKYPKNIGI ITSPTGAAIK DIIKVARNRN SSVNLIIHPA 
VVQGESAAKT VIAGLSELNK LEKIDLIIIA RGGGSMEDLW CFNDESLARA IFESKKPVVT 
GIGHEIDFTI SDFVSDLRAA TPSNAAELTV YNEHELKSII DNFERILKHR IKIEIANRSY 
ELDILYSKIE KNSPKSKIEK QKLHIDRIMT LMNHEIKNRI SYELKRFEKS YSLLNAYNPL 
NVLNKGYSII QDENEKIISS KNLLKTENDV KITLKDGTVD AHITLKE